RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CHRNGP07510 517 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 FGF4P08620 206 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 OR4A8P0C604 315 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 FKBP2P26885 142 aaKnown RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 MPGP29372 298 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 IL2RGP31785 369 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 SOAT1P35610 550 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 PGM1P36871 562 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 IDH2P48735 452 aaKnown RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 CLK1P49759 484 aaKnown RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 SLC35A1P78382 337 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 ADIPOQQ15848 244 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 ARHGAP11BQ3KRB8 267 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 IL23RQ5VWK5 629 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 VHLLQ6RSH7 139 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 KLHL24Q6TFL4 600 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 C16orf62Q7Z3J2 963 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 GRINAQ7Z429 371 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 HMGN2P46Q86SG4 172 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 MEX3DQ86XN8 651 aaKnown RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 IQCF2Q8IXL9 164 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 NATD1Q8N6N6 113 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 TWIST2Q8WVJ9 160 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 XAGE5Q8WWM1 108 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 PPP3R2Q96LZ3 170 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 C3orf30Q96M34 536 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 KCNS3Q9BQ31 491 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 NAA11Q9BSU3 229 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 DUSP26Q9BV47 211 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 BHLHE41Q9C0J9 482 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 SAP130Q9H0E3 1048 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 MYOZ1Q9NP98 299 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 CA10Q9NS85 328 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 SLC35A3Q9Y2D2 325 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 SLC9A8Q9Y2E8 581 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 MALRD1Q5VYJ5 2156 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 TMED7-TICAM2A0A0A6YYA0 188 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 IGHV1-18A0A0C4DH31 117 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM72A0PK05 275 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 CLDN24A6NM45 220 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 COPEO14579 308 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 EIF1BO60739 113 aaKnown RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 LILRA1O75019 489 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 CRYAAP02489 173 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 FAM153BP0C7A2 387 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 OR12D1P0DN82 309 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 IMPDH2P12268 514 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 DAOP14920 347 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 PRPS1L1P21108 318 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 APEX1P27695 318 aaKnown RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 IDH3GP51553 393 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 CHN2P52757 468 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 KCNJ10P78508 379 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 SLC17A1Q14916 467 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 PCLAFQ15004 111 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ZSWIM7Q19AV6 140 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 PGS1Q32NB8 556 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 FAM153CQ494X1 144 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ATP6AP1LQ52LC2 224 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 C6orf136Q5SQH8 315 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 TYW3Q6IPR3 259 aaKnown RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ANKRD16Q6P6B7 361 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 EMBQ6PCB8 327 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 AAED1Q7RTV5 226 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 RIMKLAQ8IXN7 391 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 CLECL1Q8IZS7 167 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ZCCHC24Q8N2G6 241 aaKnown RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ARFGAP2Q8N6H7 521 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ZIC4Q8N9L1 334 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 LINC01356Q8N9X3 169 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 POMGNT2Q8NAT1 580 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 FNDC5Q8NAU1 212 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 FAM71CQ8NEG0 241 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 AGR3Q8TD06 166 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 CNOT9Q92600 299 aaKnown RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 RAB8BQ92930 207 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 AURKBQ96GD4 344 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 SLC35G5Q96KT7 338 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF385AQ96PM9 386 aaKnown RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 SLC38A2Q96QD8 506 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 SNX18Q96RF0 628 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF350Q9GZX5 532 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ADAM19Q9H013 955 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 RAB1BQ9H0U4 201 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 OR51I1Q9H343 314 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 PLK3Q9H4B4 646 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-206ENST00000483030 EXD2Q9NVH0 621 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM45AQ9NWC5 275 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 OSGIN1Q9UJX0 560 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 TMED7Q9Y3B3 224 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 WDR45Q9Y484 360 aa6.42□□□□□ -1.38
CSDE1-206ENST00000483030 ANK2Q01484 3957 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 YLPM1P49750 1951 aaKnown RBP6.41□□□□□ -1.38
CSDE1-206ENST00000483030 A0A096LPE4 126 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 RNF103-CHMP3A0A140T963 221 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 A0A1W2PPZ6 126 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 SH3PXD2BA1X283 911 aa6.41□□□□□ -1.38
CSDE1-206ENST00000483030 ZC3H12DA2A288 527 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms