RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GUSBP08236 651 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 NR2F1P10589 423 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 HOXB9P17482 250 aaPredicted RBP7.08□□□□□ -1.28
USP48-207ENST00000471752 CDH2P19022 906 aaPredicted RBP7.08□□□□□ -1.28
USP48-207ENST00000471752 CD40P25942 277 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SLC1A3P43003 542 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 CDH11P55287 796 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SRSF2Q01130 221 aaKnown RBP7.08□□□□□ -1.28
USP48-207ENST00000471752 VEZF1Q14119 521 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SLC17A1Q14916 467 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 MST1LQ2TV78 715 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 ATAD3BQ5T9A4 648 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 C11orf71Q6IPW1 123 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 BHLHB9Q6PI77 547 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SLC2A7Q6PXP3 512 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 LRRC74BQ6ZQY2 392 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 GRINAQ7Z429 371 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SERPINA11Q86U17 422 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 MYPOPQ86VE0 399 aaPredicted RBP7.08□□□□□ -1.28
USP48-207ENST00000471752 FUNDC1Q8IVP5 155 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SLC38A5Q8WUX1 472 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 APH1AQ96BI3 265 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 TLCD1Q96CP7 247 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 ZNF837Q96EG3 531 aaPredicted RBP7.08□□□□□ -1.28
USP48-207ENST00000471752 MUS81Q96NY9 551 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 POTEKPQ9BYX7 375 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 CXorf56Q9H5V9 222 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 ESRP2Q9H6T0 727 aaKnown RBP7.08□□□□□ -1.28
USP48-207ENST00000471752 SLC52A3Q9NQ40 469 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SERINC1Q9NRX5 453 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 TMEM181Q9P2C4 612 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SLC35A3Q9Y2D2 325 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 CR1P17927 2039 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 A0A1W2PP18 115 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CIB4A0PJX0 185 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CDHR4A6H8M9 788 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 ZNF503-AS2A6NEH8 195 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CFAP73A6NFT4 308 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 HDAC3O15379 428 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 ZNF500O60304 480 aaPredicted RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 TPST1O60507 370 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 MRPL33O75394 65 aaKnown RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 UPK3AO75631 287 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 SLC22A3O75751 556 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 TTKP33981 857 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CRATP43155 626 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 SELENOPP49908 381 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 POLR2HP52434 150 aaKnown RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 SLC16A1P53985 500 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CLNS1AP54105 237 aaKnown RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 CSNK2A1P68400 391 aaPredicted RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 EGR4Q05215 589 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 PDK3Q15120 406 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 OR7A5Q15622 319 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 GLIPR1L2Q4G1C9 344 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 TIMM23BQ5SRD1 257 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CASP12Q6UXS9 341 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 SPATA19Q7Z5L4 167 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 DTX2Q86UW9 622 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 EPHX4Q8IUS5 362 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CADM2Q8N3J6 435 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 ARIH2OSQ8N7S6 290 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 VPS37AQ8NEZ2 397 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 OR52P1PQ8NH57 321 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 WDR60Q8WVS4 1066 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 TMEM234Q8WY98 164 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 GTF2H4Q92759 462 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 TMEM19Q96HH6 336 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 MAELQ96JY0 434 aaKnown RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 EBF4Q9BQW3 602 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 CACNG6Q9BXT2 260 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 PAIP1Q9H074 479 aaKnown RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 IKZF5Q9H5V7 419 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 TPT1P8Q9HAU6 139 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 HHATLQ9HCP6 504 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 SLCO1B3Q9NPD5 702 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 EXOSC3Q9NQT5 275 aaKnown RBP7.07□□□□□ -1.28
USP48-207ENST00000471752 POLE3Q9NRF9 147 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 THAP1Q9NVV9 213 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 SLC25A37Q9NYZ2 338 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 TRAPPC4Q9Y296 219 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 HDGFL3Q9Y3E1 203 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 PCDHB14Q9Y5E9 798 aa7.07□□□□□ -1.28
USP48-207ENST00000471752 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.07□□□□□ -1.283e-6■□□□□ 10.1
USP48-207ENST00000471752 DSPPQ9NZW4 1301 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 A0A096LPE4 126 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 A0A1W2PPZ6 126 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 FAM234BA2RU67 622 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 ATP6V1G2-DDX39BF2Z307 99 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 RFXANKO14593 260 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 TPST2O60704 377 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 NPIPB7O75200 414 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 CRLF1O75462 422 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 LGI1O95970 557 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 BCHEP06276 602 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 CELA3BP08861 270 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 IL7RP16871 459 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 CBLP22681 906 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 HTR2AP28223 471 aa7.06□□□□□ -1.28
USP48-207ENST00000471752 IDUAP35475 653 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms