RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 EMC3Q9P0I2 261 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 GPR52Q9Y2T5 361 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 CAPN7Q9Y6W3 813 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 GPR171O14626 319 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 SIAH2O43255 324 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 RAMP1O60894 148 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 CNOT4O95628 575 aaKnown RBP12.54□□□□□ -0.4
TOP3B-215ENST00000470338 GPIP06744 558 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 C8BP07358 591 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 EDNRAP25101 427 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 HTR2AP28223 471 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 DNAJA1P31689 397 aaKnown RBP12.54□□□□□ -0.4
TOP3B-215ENST00000470338 NTF4P34130 210 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 PCGF2P35227 344 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 IDUAP35475 653 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 CEACAM7Q14002 265 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 P2RY6Q15077 328 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 DUSP7Q16829 419 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 VMACQ2NL98 169 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 RABL3Q5HYI8 236 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 SFRP5Q5T4F7 317 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 ANKRD34AQ69YU3 496 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 PAQR6Q6TCH4 344 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 Q6ZT83 130 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 CCDC80Q76M96 950 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 PATL1Q86TB9 770 aaKnown RBP12.54□□□□□ -0.4
TOP3B-215ENST00000470338 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
TOP3B-215ENST00000470338 PCYOX1LQ8NBM8 494 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 RP9Q8TA86 221 aaKnown RBP12.54□□□□□ -0.4
TOP3B-215ENST00000470338 NRGNQ92686 78 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 WFDC6Q9BQY6 131 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 TRIM2Q9C040 744 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 GID8Q9NWU2 228 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 ARMCX1Q9P291 453 aa12.54□□□□□ -0.4
TOP3B-215ENST00000470338 A0A1B0GWA3 101 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 ENO4A6NNW6 628 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 TPST2O60704 377 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 CCDC22O60826 627 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 LGI1O95970 557 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 ADAP00813 363 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 THBDP07204 575 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 SEC24CP53992 1094 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 EGR4Q05215 589 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 SLC17A1Q14916 467 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 INTS11Q5TA45 600 aaKnown RBP12.53□□□□□ -0.4
TOP3B-215ENST00000470338 C1orf140Q5VVS0 124 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 FAM91A1Q658Y4 838 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 TMEM99Q8N816 258 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 SMYD1Q8NB12 490 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 STEAP2Q8NFT2 490 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 GPR32P1Q8NGA4 272 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 OR52E4Q8NGH9 312 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-215ENST00000470338 ZNF583Q96ND8 569 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 ECSITQ9BQ95 431 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 LIME1Q9H400 295 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 RPS6KB2Q9UBS0 482 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
TOP3B-215ENST00000470338 PRSS50Q9UI38 385 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 NOSIPQ9Y314 301 aaKnown RBP12.53□□□□□ -0.4
TOP3B-215ENST00000470338 CELSR1Q9NYQ6 3014 aa12.53□□□□□ -0.4
TOP3B-215ENST00000470338 A0A1W2PPR1 153 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 AQP7P3A6NL99 342 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ELOA3DA6NLF2 546 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-215ENST00000470338 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 FZD7O75084 574 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 AKR7A3O95154 331 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 OPN1SWP03999 348 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 PNMTP11086 282 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 P2RY4P51582 365 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 CRYBA2P53672 197 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 RGS8P57771 180 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ITGADQ13349 1161 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 VEZF1Q14119 521 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 OR1Q1Q15612 314 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 OR7A5Q15622 319 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 NRF1Q16656 503 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ELOA3BQ3SY89 546 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 OTUD3Q5T2D3 398 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-215ENST00000470338 FBXW10Q5XX13 1052 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ULK3Q6PHR2 472 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ZNF100Q8IYN0 542 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 POU5F2Q8N7G0 328 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ELOA3Q8NG57 546 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 MFSD8Q8NHS3 518 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 NINJ1Q92982 152 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 SLC38A4Q969I6 547 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 TAMM41Q96BW9 452 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 RCN3Q96D15 328 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ZC3HAV1LQ96H79 300 aaKnown RBP12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ARHGDIGQ99819 225 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 ELAC2Q9BQ52 826 aaKnown RBP12.52□□□□□ -0.41
TOP3B-215ENST00000470338 PTDSS2Q9BVG9 487 aa12.52□□□□□ -0.41
TOP3B-215ENST00000470338 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms