RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MOKQ9UQ07 419 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 IFT52Q9Y366 437 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 PEX16Q9Y5Y5 336 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 SMAD5-AS1Q9Y6J3 95 aa2.23□□□□□ -2.05
HDAC6-212ENST00000461608 CFAP65Q6ZU64 1925 aaKnown RBP2.23□□□□□ -2.05
HDAC6-212ENST00000461608 FANCIQ9NVI1 1328 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 IGHV3OR16-13A0A075B7E8 117 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 IGHV1OR21-1A0A087WYE8 117 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 IGKV6D-41A0A0C4DH26 115 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 A0A1B0GUS0 222 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 XKRY2A2RUG3 117 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 KIF2AO00139 706 aaPredicted RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 AP3B1O00203 1094 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 PHOX2AO14813 284 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 CIB2O75838 187 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 IGHV3-48P01763 117 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 HSPB1P04792 205 aaKnown RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 GIG44P09565 113 aaPredicted RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 OR8U8P0C7N1 319 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 MCF2P10911 925 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 PBLDP30039 288 aaPredicted RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 SHMT2P34897 504 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 CRYBB2P43320 205 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 KIR2DS4P43632 304 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 QARSP47897 775 aaKnown RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ACTR3P61158 418 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ARFRP1Q13795 201 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 VGLL4Q14135 290 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 RABL6Q3YEC7 729 aaPredicted RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 CCDC183Q5T5S1 534 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 C1orf146Q5VVC0 180 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 OR52E8Q6IFG1 317 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ENPP6Q6UWR7 440 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ACOT7LQ6ZUV0 252 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 PGAP1Q75T13 922 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 PAQR7Q86WK9 346 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 NUDCD3Q8IVD9 361 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 CNPY4Q8N129 248 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 FTMTQ8N4E7 242 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ALLCQ8N6M5 410 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 OR10H4Q8NGA5 316 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 OR8J1Q8NGP2 316 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ZPLD1Q8TCW7 415 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 PAQR8Q8TEZ7 354 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 UFD1Q92890 307 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 STMN2Q93045 179 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 FBXO32Q969P5 355 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 RASD2Q96D21 266 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 SLC25A38Q96DW6 304 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF641Q96N77 438 aaPredicted RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 RNF2Q99496 336 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 MAPKAP1Q9BPZ7 522 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 CHRDL1Q9BU40 450 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 SUDS3Q9H7L9 328 aaPredicted RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 FOLH1BQ9HBA9 442 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF639Q9UID6 485 aa2.22□□□□□ -2.05
HDAC6-212ENST00000461608 UBQLN1Q9UMX0 589 aaKnown RBP2.22□□□□□ -2.05
HDAC6-212ENST00000461608 AGRNO00468 2067 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 IGLV3-10A0A075B6K4 115 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 VSTM2BA6NLU5 285 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 ZFP92A6NM28 416 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 DCTN6O00399 190 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 HDAC3O15379 428 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 LY6G6DO95868 133 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 SERPINA3P01011 423 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 IGKV3-15P01624 115 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 KLK3P07288 261 aaPredicted RBP2.21□□□□□ -2.06
HDAC6-212ENST00000461608 TROVE2P10155 538 aaKnown RBP eCLIP2.21□□□□□ -2.06
HDAC6-212ENST00000461608 POLR2EP19388 210 aaKnown RBP2.21□□□□□ -2.06
HDAC6-212ENST00000461608 HMGB2P26583 209 aaKnown RBP2.21□□□□□ -2.06
HDAC6-212ENST00000461608 CD1CP29017 333 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 HSD17B2P37059 387 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 OPRD1P41143 372 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 OR3A4PP47883 348 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 DIO3P55073 304 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 MRPL28Q13084 256 aaKnown RBP2.21□□□□□ -2.06
HDAC6-212ENST00000461608 ORC2Q13416 577 aaPredicted RBP2.21□□□□□ -2.06
HDAC6-212ENST00000461608 IDI1Q13907 227 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 OXA1LQ15070 435 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 PPP1R7Q15435 360 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 DGUOKQ16854 277 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 PRAMEF5Q5TYX0 476 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 PRAMEF6Q5VXH4 476 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 FBXO16Q8IX29 292 aaPredicted RBP2.21□□□□□ -2.06
HDAC6-212ENST00000461608 CDH26Q8IXH8 852 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 PRR22Q8IZ63 422 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 RDH10Q8IZV5 341 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 FNDC5Q8NAU1 212 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 CATSPER1Q8NEC5 780 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 OR10G3Q8NGC4 313 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 OR9K2Q8NGE7 335 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 SLC2A14Q8TDB8 520 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 TM4SF19Q96DZ7 209 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 PAGE5Q96GU1 130 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 TIMD4Q96H15 378 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 PGLYRP4Q96LB8 373 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 TCEANC2Q96MN5 208 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 CCDC77Q9BR77 488 aa2.21□□□□□ -2.06
HDAC6-212ENST00000461608 RNF126Q9BV68 326 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms