RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 HIP1O00291 1037 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 LAD1O00515 517 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 PRPSAP2O60256 369 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 MFN2O95140 757 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 IGLV3-19P01714 112 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 NPIPA8P0DM63 369 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 CALCBP10092 127 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 ICAM2P13598 275 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 CRISP2P16562 243 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 FGF9P31371 208 aaPredicted RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 KPNA2P52292 529 aaKnown RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 HSD17B7P56937 341 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 ACTA2P62736 377 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 ACTC1P68032 377 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 CNTN2Q02246 1040 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 TRIM16LQ309B1 348 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 C12orf60Q5U649 245 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 C6orf89Q6UWU4 347 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 C6orf120Q7Z4R8 191 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 ACOT1Q86TX2 421 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 KIR3DL3Q8N743 410 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 OR51G2Q8NGK0 314 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 FANK1Q8TC84 345 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 BRSK1Q8TDC3 778 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 MRPL38Q96DV4 380 aaKnown RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 SEC22AQ96IW7 307 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 TSG101Q99816 390 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 SLC35A5Q9BS91 424 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 MRPL13Q9BYD1 178 aaKnown RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 NXF5Q9H1B4 397 aaKnown RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 RBAKQ9NYW8 714 aaPredicted RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 C6orf203Q9P0P8 240 aaPredicted RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 DEC1Q9P2X7 70 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 KIF25Q9UIL4 384 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 NPIPA1Q9UND3 350 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 GSTK1Q9Y2Q3 226 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 KIF3AQ9Y496 699 aa1.95□□□□□ -2.1
MDM2-227ENST00000540709 MTCL1Q9Y4B5 1905 aaKnown RBP1.95□□□□□ -2.1
MDM2-227ENST00000540709 PDS5BQ9NTI5 1447 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 A0A0G2JRQ6 117 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 F8WDY8 70 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 CTAGE5O15320 804 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 CHADO15335 359 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 CLDN3O15551 220 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 TPST2O60704 377 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 LRATO95237 230 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 MOSP00540 346 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 TPSB2P20231 275 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 CYP2F1P24903 491 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 RFC4P35249 363 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 GLP1RP43220 463 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 KIR2DS4P43632 304 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 DAP3P51398 398 aaKnown RBP1.94□□□□□ -2.1
MDM2-227ENST00000540709 PLA2G16P53816 162 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 EWSR1Q01844 656 aaKnown RBP eCLIP1.94□□□□□ -2.1
MDM2-227ENST00000540709 TGFBR3Q03167 851 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 TPSAB1Q15661 275 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 TPD52L1Q16890 204 aaPredicted RBP1.94□□□□□ -2.1
MDM2-227ENST00000540709 DEFB116Q30KQ4 102 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 BOLA3Q53S33 107 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 TMEM41BQ5BJD5 291 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 KLF17Q5JT82 389 aaPredicted RBP1.94□□□□□ -2.1
MDM2-227ENST00000540709 CNSTQ6PJW8 725 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 TMIGD1Q6UXZ0 262 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 UNC5DQ6UXZ4 953 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 COX15Q7KZN9 410 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 CENPLQ8N0S6 344 aaPredicted RBP1.94□□□□□ -2.1
MDM2-227ENST00000540709 ZNF619Q8N2I2 560 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 FTMTQ8N4E7 242 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 CLDN19Q8N6F1 224 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 DENND6BQ8NEG7 585 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 OR56B4Q8NH76 319 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 HTR3CQ8WXA8 447 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 CHCHD10Q8WYQ3 142 aaPredicted RBP1.94□□□□□ -2.1
MDM2-227ENST00000540709 C12orf66Q96MD2 445 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 OR11A1Q9GZK7 315 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 ROGDIQ9GZN7 287 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 ING2Q9H160 280 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 RWDD1Q9H446 243 aaPredicted RBP1.94□□□□□ -2.1
MDM2-227ENST00000540709 CALHM2Q9HA72 323 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 GNG12Q9UBI6 72 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 ODF2LQ9ULJ1 636 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 COPS3Q9UNS2 423 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 TRAF3IP3Q9Y228 551 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 U3KQV3 271 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 PLEKHH1Q9ULM0 1364 aa1.94□□□□□ -2.1
MDM2-227ENST00000540709 A0A087WZY1 265 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 MAPK13O15264 365 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 RS1O15537 224 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 PTBP3O95758 552 aaKnown RBP1.93□□□□□ -2.1
MDM2-227ENST00000540709 LGI1O95970 557 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 LGALS2P05162 132 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 ATP6V1B2P21281 511 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 LEPP41159 167 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 TFPI2P48307 235 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 BIDP55957 195 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 MESDQ14696 234 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 TATDN3Q17R31 274 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 PIGGQ5H8A4 983 aa1.93□□□□□ -2.1
MDM2-227ENST00000540709 C1orf100Q5SVJ3 147 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms