RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CCDC103Q8IW40 242 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 KBTBD8Q8NFY9 601 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 TMEM171Q8WVE6 324 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 AURKBQ96GD4 344 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 TPT1P8Q9HAU6 139 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF701Q9NV72 531 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 NPAP1Q9NZP6 1156 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 P2RX2Q9UBL9 471 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 SVEP1Q4LDE5 3571 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 PLCE1Q9P212 2302 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 CDHR4A6H8M9 788 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 DPRXA6NFQ7 191 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 CFAP73A6NFT4 308 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 UBDO15205 165 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF208O43345 1280 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 CNOT4O95628 575 aaKnown RBP12.6□□□□□ -0.39
VTI1A-209ENST00000496445 BCHEP06276 602 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 HEXAP06865 529 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 CD3EP07766 207 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 SOD3P08294 240 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 DANCRP0C864 163 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 ZCCHC18P0CG32 403 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 HOXB9P17482 250 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-209ENST00000496445 HTR3AP46098 478 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 OR2B6P58173 313 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 H3F3AP84243 136 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 LTBQ06643 244 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 CAPRIN1Q14444 709 aaKnown RBP12.6□□□□□ -0.39
VTI1A-209ENST00000496445 RPS26P11Q5JNZ5 115 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-209ENST00000496445 CLEC9AQ6UXN8 241 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF100Q8IYN0 542 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-209ENST00000496445 PIGXQ8TBF5 258 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 PMM1Q92871 262 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 ZHX1-C8orf76Q96EF9 292 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 ESRP2Q9H6T0 727 aaKnown RBP12.6□□□□□ -0.39
VTI1A-209ENST00000496445 TMEM181Q9P2C4 612 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 LAMP3Q9UQV4 416 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 CHST2Q9Y4C5 530 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 USH1CQ9Y6N9 552 aa12.6□□□□□ -0.39
VTI1A-209ENST00000496445 TMCC2O75069 709 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 PGM3O95394 542 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 TFPTP0C1Z6 253 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 FKBP2P26885 142 aaKnown RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 CRATP43155 626 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 MAGEA8P43361 318 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 POLR2JP52435 117 aaKnown RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 FOXG1P55316 489 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 DSTNP60981 165 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 GNA13Q14344 377 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 PPA1Q15181 289 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF672Q499Z4 452 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 TIMM23BQ5SRD1 257 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 AGBL2Q5U5Z8 902 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 FBXW9Q5XUX1 488 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 EPGNQ6UW88 154 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 PEX5LQ8IYB4 626 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 OR52P1PQ8NH57 321 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 SLC38A5Q8WUX1 472 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 GTF2H4Q92759 462 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 FBXW5Q969U6 566 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 APH1AQ96BI3 265 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 DDIT4LQ96D03 193 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 ITCHQ96J02 903 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 TRIM2Q9C040 744 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 ADAM19Q9H013 955 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 PAIP1Q9H074 479 aaKnown RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 CXorf56Q9H5V9 222 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 MALT1Q9UDY8 824 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 TRAPPC4Q9Y296 219 aa12.59□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF443Q9Y2A4 671 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 NOSIPQ9Y314 301 aaKnown RBP12.59□□□□□ -0.39
VTI1A-209ENST00000496445 SHISA9B4DS77 424 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 SMAD7O15105 426 aaKnown RBP12.58□□□□□ -0.4
VTI1A-209ENST00000496445 RAD51DO75771 328 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 ANP32DO95626 131 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 LY6G6DO95868 133 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 NUDT7P0C024 238 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 GGT1P19440 569 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 MRPL19P49406 292 aaKnown RBP12.58□□□□□ -0.4
VTI1A-209ENST00000496445 CRISP3P54108 245 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 RPS4XP62701 263 aaKnown RBP12.58□□□□□ -0.4
VTI1A-209ENST00000496445 SLC35A1P78382 337 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 C6orf10Q5SRN2 563 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 SLC2A7Q6PXP3 512 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 MIER2Q8N344 545 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 C7orf26Q96N11 449 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 EBF4Q9BQW3 602 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 RMND5AQ9H871 391 aa12.58□□□□□ -0.4
VTI1A-209ENST00000496445 SLCO1B3Q9NPD5 702 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms