RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	IRGM	A1A4Y4	181 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	STMND1	H3BQB6	276 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	MASP2	O00187	686 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	TERT	O14746	1132 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	SUSD5	O60279	629 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	SLC25A12	O75746	678 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	LCK	P06239	509 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	ADORA3	P0DMS8	318 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	SSR4	P51571	173 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	LIMK1	P53667	647 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	CDH11	P55287	796 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	RPS4X	P62701	263 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	GABRE	P78334	506 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	FOXK2	Q01167	660 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	IRF3	Q14653	427 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	SYT6	Q5T7P8	510 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	UBE2U	Q5VVX9	321 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	NXNL2	Q5VZ03	156 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	OR5M10	Q6IEU7	315 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	RTL4	Q6ZR62	310 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	CXXC5	Q7LFL8	322 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	RPS19BP1	Q86WX3	136 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	RAB43	Q86YS6	212 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	ST8SIA1	Q92185	356 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	TMEM80	Q96HE8	168 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	B3GNT4	Q9C0J1	378 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	FN3K	Q9H479	309 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	CDCP1	Q9H5V8	836 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	HINT3	Q9NQE9	182 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	CMC2	Q9NRP2	79 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	P4HTM	Q9NXG6	502 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	TAS2R16	Q9NYV7	291 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	MED11	Q9P086	117 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	WARS2	Q9UGM6	360 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	TMED7	Q9Y3B3	224 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	PCDHGB6	Q9Y5F9	930 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	HRH3	Q9Y5N1	445 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	COMMD3-BMI1	R4GMX3	469 aa		11.18	□□□□□ -0.62
HDLBP-231	ENST00000467435	TRAV36DV7	A0A075B6V5	113 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	IGLV3-32	A0A0A0MS00	114 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	TMEM72	A0PK05	275 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	RIIAD1	A6NNX1	92 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435		B4DXG7	233 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	MCIDAS	D6RGH6	385 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZNF701	M0R085	212 aa	Predicted RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	RAB36	O95755	333 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	PTH	P01270	115 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	IFNG	P01579	166 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	ADRA2A	P08913	450 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	ICAM2	P13598	275 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZNF3	P17036	446 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	PRKCA	P17252	672 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	F8A1	P23610	371 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	MSX1	P28360	303 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	HTR3A	P46098	478 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	RPS5	P46782	204 aa	Known RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	ST13	P50502	369 aa	Known RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	MLF1	P58340	268 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	CHAF1B	Q13112	559 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	GXYLT1	Q4G148	440 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	SLC35F1	Q5T1Q4	408 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	AADACL4	Q5VUY2	407 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	NIPAL3	Q6P499	406 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	PLBD1	Q6P4A8	553 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	IL20RB	Q6UXL0	311 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZNF367	Q7RTV3	350 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	IGFN1	Q86VF2	1251 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	GID4	Q8IVV7	300 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	DND1	Q8IYX4	353 aa	Known RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	BBS1	Q8NFJ9	593 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	OR52I1	Q8NGK6	324 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	LIPH	Q8WWY8	451 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	RFK	Q969G6	155 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	NACC2	Q96BF6	587 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	KTI12	Q96EK9	354 aa	Predicted RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	RNFT2	Q96EX2	444 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	MOGAT1	Q96PD6	335 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	TAPBPL	Q9BX59	468 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	CDCA4	Q9BXL8	241 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	NDEL1	Q9GZM8	345 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	NAA50	Q9GZZ1	169 aa	Known RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	NANS	Q9NR45	359 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	PTTG2	Q9NZH5	202 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	HIF3A	Q9Y2N7	669 aa		11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	MRPS18B	Q9Y676	258 aa	Known RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.17	□□□□□ -0.62
HDLBP-231	ENST00000467435	SPEG	Q15772	3267 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	DMD	P11532	3685 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	LOC101059948	A0A1B0GTJ6	334 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZC3H12D	A2A288	527 aa	Known RBP	11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	FAM183A	A6NL82	134 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	FAM47E-STBD1	D6RA91	191 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	TRMU	O75648	421 aa	Known RBP	11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	WISP1	O95388	367 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	BGLAP	P02818	100 aa		11.16	□□□□□ -0.62
HDLBP-231	ENST00000467435	ASAH2B	P0C7U1	165 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms