RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 OSTF1Q92882 214 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 RHNO1Q9BSD3 238 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 ADAM19Q9H013 955 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 STMN3Q9NZ72 180 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 FBXL2Q9UKC9 423 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 ARGFXA6NJG6 315 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 SLC1A7O00341 560 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 NKX2-8O15522 239 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 DXOO77932 396 aaKnown RBP11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CRHBPP24387 322 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 GIPRP48546 466 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 SMSP52788 366 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 NUDT6P53370 316 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 AIMP2Q13155 320 aaKnown RBP11.32□□□□□ -0.6
CHMP3-204ENST00000409727 BROXQ5VW32 411 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 SLC22A10Q63ZE4 541 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 C12orf73Q69YU5 71 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 H3F3CQ6NXT2 135 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 IGF2-ASQ6U949 168 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CYP4Z2PQ8N1L4 340 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 ATP6V1C2Q8NEY4 427 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 OR4Q3Q8NH05 313 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 KTI12Q96EK9 354 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-204ENST00000409727 FER1L6-AS2Q96M78 137 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 IP6K3Q96PC2 410 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 ENKD1Q9H0I2 346 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 OR52D1Q9H346 318 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 AMBNQ9NP70 447 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 KLK13Q9UKR3 277 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CDH10Q9Y6N8 788 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 TMED7-TICAM2A0A0A6YYA0 188 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 SUSD5O60279 629 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 FAM20BO75063 409 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 SLC25A12O75746 678 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 PRKCAP17252 672 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 WT1P19544 449 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-204ENST00000409727 RPS5P46782 204 aaKnown RBP11.31□□□□□ -0.6
CHMP3-204ENST00000409727 MASP1P48740 699 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 ZNF41P51814 821 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-204ENST00000409727 POLR2HP52434 150 aaKnown RBP11.31□□□□□ -0.6
CHMP3-204ENST00000409727 FXYD6P3P58550 94 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 CDK5Q00535 292 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 EGR4Q05215 589 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 RBM48Q5RL73 367 aaKnown RBP11.31□□□□□ -0.6
CHMP3-204ENST00000409727 SMARCD3Q6STE5 483 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 LINC00696Q6ZRV3 163 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 BCDIN3DQ7Z5W3 292 aaKnown RBP11.31□□□□□ -0.6
CHMP3-204ENST00000409727 ARMC10Q8N2F6 343 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 TCEANCQ8N8B7 351 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 WDSUB1Q8N9V3 476 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 OR4K17Q8NGC6 315 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 OR5M1Q8NGP8 315 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 RHOXF1Q8NHV9 184 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 TMEM234Q8WY98 164 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 TNFRSF13CQ96RJ3 184 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 IL20Q9NYY1 176 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 SIGLEC7Q9Y286 467 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 TMED7Q9Y3B3 224 aa11.31□□□□□ -0.6
CHMP3-204ENST00000409727 ASPMQ8IZT6 3477 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 TMEM72A0PK05 275 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 ZC3H12DA2A288 527 aaKnown RBP11.3□□□□□ -0.6
CHMP3-204ENST00000409727 TLX2O43763 284 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-204ENST00000409727 PRKYO43930 277 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 CLPTM1O96005 669 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 BMP7P18075 431 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 CYB561P49447 251 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 SUMO3P55854 103 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-204ENST00000409727 GPR85P60893 370 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 FOXF1Q12946 379 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 RTP5Q14D33 572 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 SNAPC1Q16533 368 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 ABHD17BQ5VST6 288 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 C1QL3Q5VWW1 255 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 THSD4Q6ZMP0 1018 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 RTL4Q6ZR62 310 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 IGFN1Q86VF2 1251 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 OR2M3Q8NG83 312 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 OR52L1Q8NGH7 329 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 PAQR8Q8TEZ7 354 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 MOGAT1Q96PD6 335 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 TMEM43Q9BTV4 400 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 IFT27Q9BW83 186 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 MRPS26Q9BYN8 205 aaKnown RBP11.3□□□□□ -0.6
CHMP3-204ENST00000409727 OR11A1Q9GZK7 315 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 LHPPQ9H008 270 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 SH2D2AQ9NP31 389 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 MED17Q9NVC6 651 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 DNAJC27Q9NZQ0 273 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 TEKT2Q9UIF3 430 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 EML6Q6ZMW3 1958 aa11.3□□□□□ -0.6
CHMP3-204ENST00000409727 A0A0G2JMM0 328 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 A0A1W2PPB8 328 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 A0A1W2PRS3 328 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 KIR3DP1A8MWS1 328 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms