RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 DLEU7Q6UYE1 221 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 BEND4Q6ZU67 534 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF550Q7Z398 422 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 NUFIP2Q7Z417 695 aaKnown RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 STK32CQ86UX6 486 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 C10orf111Q8N326 155 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 CLIP4Q8N3C7 705 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 ARL5BQ96KC2 179 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 MED18Q9BUE0 208 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 OR11A1Q9GZK7 315 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 LIME1Q9H400 295 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 IKZF5Q9H5V7 419 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 CACYBPQ9HB71 228 aaKnown RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 BCL2L10Q9HD36 194 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 KLHL9Q9P2J3 617 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 ING1Q9UK53 422 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 TMED7Q9Y3B3 224 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 GMEB1Q9Y692 573 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 CCDC168Q8NDH2 2452 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 SPG11Q96JI7 2443 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 PGM3O95394 542 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 PMS2P2O95744 297 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 HRGP04196 525 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 ARAFP10398 606 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 ACAA2P42765 397 aaKnown RBP13□□□□□ -0.33
ERCC1-203ENST00000340192 CLK1P49759 484 aaKnown RBP13□□□□□ -0.33
ERCC1-203ENST00000340192 RASGEF1BQ0VAM2 473 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 POU4F3Q15319 338 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 ZSWIM7Q19AV6 140 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF311Q5JNZ3 666 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 METTL21CQ5VZV1 264 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 ANKRD34AQ69YU3 496 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 STAC2Q6ZMT1 411 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 MTDHQ86UE4 582 aaKnown RBP13□□□□□ -0.33
ERCC1-203ENST00000340192 NFKBIDQ8NI38 313 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 BBS10Q8TAM1 723 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 PSD2Q9BQI7 771 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 TACO1Q9BSH4 297 aaKnown RBP13□□□□□ -0.33
ERCC1-203ENST00000340192 SPATA9Q9BWV2 254 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 TMEM120AQ9BXJ8 343 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 ARMC7Q9H6L4 198 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 BCO1Q9HAY6 547 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 FGFR1OP2Q9NVK5 253 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF226Q9NYT6 803 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 LEF1Q9UJU2 399 aaPredicted RBP13□□□□□ -0.33
ERCC1-203ENST00000340192 CORO2BQ9UQ03 480 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 IFT52Q9Y366 437 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 NDUFAF1Q9Y375 327 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 HDGFL3Q9Y3E1 203 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 CHST2Q9Y4C5 530 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 FREM1Q5H8C1 2179 aa13□□□□□ -0.33
ERCC1-203ENST00000340192 TMEM72A0PK05 275 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 ANGPT2O15123 496 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF208O43345 1280 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 TROVE2P10155 538 aaKnown RBP eCLIP12.99□□□□□ -0.33
ERCC1-203ENST00000340192 PRG2P13727 222 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 GPX2P18283 190 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 GUCY1A3Q02108 690 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 TFAP2EQ6VUC0 442 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 C22orf34Q6ZV56 151 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 SERPINA11Q86U17 422 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 CADM2Q8N3J6 435 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF775Q96BV0 537 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-203ENST00000340192 DDIT4LQ96D03 193 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 ZC3HAV1LQ96H79 300 aaKnown RBP12.99□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF300Q96RE9 604 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-203ENST00000340192 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-203ENST00000340192 ADAM19Q9H013 955 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 FANCFQ9NPI8 374 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 C6orf203Q9P0P8 240 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-203ENST00000340192 ST6GALNAC2Q9UJ37 374 aa12.99□□□□□ -0.33
ERCC1-203ENST00000340192 EVPLLA8MZ36 301 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 SIAH2O43255 324 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 VIMP08670 466 aaKnown RBP12.98□□□□□ -0.33
ERCC1-203ENST00000340192 ETS2P15036 469 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 CXCR1P25024 350 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 MAP2K6P52564 334 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 OR2B6P58173 313 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 COPZ1P61923 177 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 CDK6Q00534 326 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 SF3A3Q12874 501 aaKnown RBP eCLIP12.98□□□□□ -0.33
ERCC1-203ENST00000340192 TESK1Q15569 626 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 ADRM1Q16186 407 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 RUNDC3AQ59EK9 446 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 ABLIM2Q6H8Q1 611 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 WBP2NLQ6ICG8 309 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 CGB2Q6NT52 195 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 REEP3Q6NUK4 255 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 DHDDSQ86SQ9 333 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 RETREG3Q86VR2 466 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 CXorf67Q86X51 503 aaPredicted RBP12.98□□□□□ -0.33
ERCC1-203ENST00000340192 DPP10Q8N608 796 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 TSPEARQ8WU66 669 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 ZHX1-C8orf76Q96EF9 292 aa12.98□□□□□ -0.33
ERCC1-203ENST00000340192 RSPO3Q9BXY4 272 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms