RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 HMGB4Q8WW32 186 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 ACSS1Q9NUB1 689 aaPredicted RBP13.78□□□□□ -0.2
NXF1-213ENST00000532297 IL20Q9NYY1 176 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 CPNE7Q9UBL6 633 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 CA5BQ9Y2D0 317 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 MYO9BQ13459 2157 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 A0A1B0GUH1 482 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 ARPC5O15511 151 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 ZIC2O95409 532 aaPredicted RBP13.78□□□□□ -0.2
NXF1-213ENST00000532297 GIPP09681 153 aaPredicted RBP13.78□□□□□ -0.2
NXF1-213ENST00000532297 S100A11P31949 105 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 CDK3Q00526 305 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 REEP5Q00765 189 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 GNA13Q14344 377 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 GAB4Q2WGN9 574 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 HNRNPA1L2Q32P51 320 aaKnown RBP13.78□□□□□ -0.2
NXF1-213ENST00000532297 RPTNQ6XPR3 784 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 ZNF765Q7L2R6 523 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 ASPGQ86U10 573 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 C17orf47Q8NEP4 570 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 OR2T33Q8NG76 320 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 OR13C5Q8NGS8 318 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 BBS10Q8TAM1 723 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 GCDHQ92947 438 aaPredicted RBP13.78□□□□□ -0.2
NXF1-213ENST00000532297 BBS4Q96RK4 519 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 INSM2Q96T92 566 aaPredicted RBP13.78□□□□□ -0.2
NXF1-213ENST00000532297 IFT27Q9BW83 186 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 HRASLSQ9HDD0 168 aa13.78□□□□□ -0.2
NXF1-213ENST00000532297 ZNF275Q9NSD4 429 aaPredicted RBP13.78□□□□□ -0.2
NXF1-213ENST00000532297 CENPVL1A0A0U1RR11 272 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 A0A1W2PR48 441 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 DNASE2O00115 360 aaPredicted RBP13.77□□□□□ -0.2
NXF1-213ENST00000532297 PLPP2O43688 288 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 MYOGP15173 224 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 MC3RP41968 323 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 STAT5AP42229 794 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 CCR9P51686 369 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 CAMK1Q14012 370 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 ACSM3Q53FZ2 586 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 OR4C11Q6IEV9 310 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 LINGO2Q7L985 606 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 NKAIN4Q8IVV8 208 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 OR9A2Q8NGT5 310 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 SUN3Q8TAQ9 357 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 SMAP2Q8WU79 429 aaPredicted RBP13.77□□□□□ -0.2
NXF1-213ENST00000532297 LCORQ96JN0 433 aaPredicted RBP13.77□□□□□ -0.2
NXF1-213ENST00000532297 SAMD8Q96LT4 415 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 CAMK1GQ96NX5 476 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 DMRTA2Q96SC8 542 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 SLC6A17Q9H1V8 727 aa13.77□□□□□ -0.2
NXF1-213ENST00000532297 ZMAT5Q9UDW3 170 aaKnown RBP13.77□□□□□ -0.2
NXF1-213ENST00000532297 OR6C65A6NJZ3 312 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 ZNF98A6NK75 572 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 GSTZ1O43708 216 aaPredicted RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 REM1O75628 298 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 CBX7O95931 251 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 FGBP02675 491 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 MT-ND5P03915 603 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 GCGRP47871 477 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 RAP2BP61225 183 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 DPTQ07507 201 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 ST3GAL3Q11203 375 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 FAM69AQ5T7M9 428 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 ERN2Q76MJ5 926 aaKnown RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 HSD17B13Q7Z5P4 300 aaPredicted RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 NRMQ8IXM6 262 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 FAM98AQ8NCA5 519 aaKnown RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 FAM71CQ8NEG0 241 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 ATOH1Q92858 354 aaPredicted RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 OTUB2Q96DC9 234 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 NDC1Q9BTX1 674 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 SCPEP1Q9HB40 452 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 SLC13A4Q9UKG4 626 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 NPFFR2Q9Y5X5 522 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 A0A0A6YYD5 115 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 J3QLW9 94 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 SIGLEC5O15389 551 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 FCMRO60667 390 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 GALR3O60755 368 aaPredicted RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 SAGP10523 405 aaPredicted RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 ZNF19P17023 458 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 FPR3P25089 353 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 VEGFBP49765 207 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 SLC16A1P53985 500 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 FLI1Q01543 452 aaPredicted RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 SIGLEC14Q08ET2 396 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 TRAM1Q15629 374 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 NHLRC1Q6VVB1 395 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 ZNF620Q6ZNG0 422 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 TMUB2Q71RG4 321 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 PXKQ7Z7A4 578 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 LRRTM4Q86VH4 590 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 PDZD9Q8IXQ8 264 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 SPICQ8N5J4 248 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 OR1S1Q8NH92 325 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 GANCQ8TET4 914 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 PAWRQ96IZ0 340 aaKnown RBP13.77□□□□□ -0.21
NXF1-213ENST00000532297 PINK1Q9BXM7 581 aa13.77□□□□□ -0.21
NXF1-213ENST00000532297 ARL6Q9H0F7 186 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms