RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CNEP1R1Q8N9A8 125 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 ZFP28Q8NHY6 868 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 PSMA8Q8TAA3 256 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 NUDT8Q8WV74 236 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 ZBED6CLQ96FA7 236 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-215ENST00000554656 C18orf12Q96KH6 178 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 LRGUKQ96M69 825 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF583Q96ND8 569 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 HS3ST6Q96QI5 342 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 BBS4Q96RK4 519 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 INPP5KQ9BT40 448 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 THUMPD3Q9BV44 507 aaKnown RBP9.51□□□□□ -0.89
SHMT2-215ENST00000554656 GLIPR2Q9H4G4 154 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 S100A14Q9HCY8 104 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 GIMAP4Q9NUV9 329 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 KLHL28Q9NXS3 571 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 PPP4R1LQ9P1A2 415 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 STOML1Q9UBI4 398 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 C19orf53Q9UNZ5 99 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF337Q9Y3M9 751 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 OR10H1Q9Y4A9 318 aa9.51□□□□□ -0.89
SHMT2-215ENST00000554656 GXYLT2A0PJZ3 443 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 CLIC1O00299 241 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 SEC14L5O43304 696 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 COQ9O75208 318 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 GMNNO75496 209 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 KRT36O76013 467 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 CPSF4O95639 269 aaKnown RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 KRT75O95678 551 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 IGKV1D-16P01601 117 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 GPIP06744 558 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 CRHP06850 196 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 INHBBP09529 407 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 IFI6P09912 130 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 PEPDP12955 493 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 HK1P19367 917 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 CRYGSP22914 178 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 MPIP34949 423 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 KRT20P35900 424 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 CD79BP40259 229 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 PCYT1AP49585 367 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 NCBP2P52298 156 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 MTPNP58546 118 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 SIRPAP78324 504 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 PSPHP78330 225 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 NKX6-1P78426 367 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 TXNL4AP83876 142 aaKnown RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 FADDQ13158 208 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 TMEM44Q2T9K0 475 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 RAET1LQ5VY80 246 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 APOOLQ6UXV4 268 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF621Q6ZSS3 439 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF550Q7Z398 422 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 P4HA3Q7Z4N8 544 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 BIVMQ86UB2 503 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 MARCH3Q86UD3 253 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 ANKRD46Q86W74 232 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 CIARTQ8N365 385 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 BHLHE22Q8NFJ8 381 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 OR2T12Q8NG77 320 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 OR4A15Q8NGL6 344 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 FNDC9Q8TBE3 224 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 SLC26A7Q8TE54 656 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 ZFP90Q8TF47 636 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 MOAP1Q96BY2 351 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 FAM120BQ96EK7 910 aaKnown RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 C1GALT1C1Q96EU7 318 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 REXO5Q96IC2 774 aaKnown RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF845Q96IR2 970 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-215ENST00000554656 AMDHD1Q96NU7 426 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 NPAS1Q99742 590 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 KLHDC3Q9BQ90 382 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 PINK1Q9BXM7 581 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 RNF122Q9H9V4 155 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 TPT1P8Q9HAU6 139 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 ABCG2Q9UNQ0 655 aa9.5□□□□□ -0.89
SHMT2-215ENST00000554656 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 CSPG4Q6UVK1 2322 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 FREM1Q5H8C1 2179 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 IGLV3-32A0A0A0MS00 114 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 ELOVL7A1L3X0 281 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 H3BML4 177 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 ARPC2O15144 300 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 TNFRSF21O75509 655 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 AQP8O94778 261 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 IL33O95760 270 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 C6orf47O95873 294 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 GGT1P19440 569 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 TCN1P20061 433 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 UQCRC2P22695 453 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 SLC7A1P30825 629 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 NTSP30990 170 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 UGT2B10P36537 528 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 MAP3K8P41279 467 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 CDKN2CP42773 168 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 SLC6A8P48029 635 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 GZMMP51124 257 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 EEF1A1P68104 462 aaKnown RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 HBA1P69905 142 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 SLC34A1Q06495 639 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms