RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, human

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-222	ENST00000470953	RAP2C	Q9Y3L5	183 aa		5.2	□□□□□ -1.58
VARS-222	ENST00000470953	IGHV4-61	A0A0C4DH41	118 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953		A0A1W2PRB8	838 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	TRPC5OS	A6NMA1	111 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	VWC2L	B2RUY7	222 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	NPIPB8	E9PQR5	432 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953		H3BNH8	94 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	UPK1A	O00322	258 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	PLOD2	O00469	737 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	SCD	O00767	359 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	SEC14L5	O43304	696 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	RAMP1	O60894	148 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CBR3	O75828	277 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	UTS2	O95399	124 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	NUDT14	O95848	222 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	C6orf47	O95873	294 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ACTL6A	O96019	429 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	FGF4	P08620	206 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CT45A8	P0DMV1	189 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CT45A9	P0DMV2	189 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	KIT	P10721	976 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	HK1	P19367	917 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	SRD5A2	P31213	254 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	RPL14	P50914	215 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CCR4	P51679	360 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ZNF41	P51814	821 aa	Predicted RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CLNS1A	P54105	237 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	PNLIPRP2	P54317	469 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	DSCR9	P59020	149 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	POU6F2	P78424	691 aa	Predicted RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	GANAB	Q14697	944 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	LASP1	Q14847	261 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ZNF385B	Q569K4	471 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CT45A2	Q5DJT8	189 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	XKR7	Q5GH72	579 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	C6orf136	Q5SQH8	315 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	NXN	Q6DKJ4	435 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	OR5M10	Q6IEU7	315 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	STAC2	Q6ZMT1	411 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953		Q6ZSR9	355 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	REC114	Q7Z4M0	266 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	GALNT10	Q86SR1	603 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	DTX2	Q86UW9	622 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	EXOC3L1	Q86VI1	746 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	PLCZ1	Q86YW0	608 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	GRAMD2A	Q8IUY3	354 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	NATD1	Q8N6N6	113 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ZNF527	Q8NB42	609 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	VPS37A	Q8NEZ2	397 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	OR4N2	Q8NGD1	307 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	OR4A15	Q8NGL6	344 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	FIG4	Q92562	907 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	PIK3R3	Q92569	461 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	MOAP1	Q96BY2	351 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	OTUB1	Q96FW1	271 aa	Predicted RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ZNF764	Q96H86	408 aa	Predicted RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	SLC35G5	Q96KT7	338 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	FCRL1	Q96LA6	429 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CCT8L2	Q96SF2	557 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	LMF2	Q9BU23	707 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	DUSP26	Q9BV47	211 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CACNG6	Q9BXT2	260 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	NUF2	Q9BZD4	464 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	DPY30	Q9C005	99 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	TRIM2	Q9C040	744 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	SLITRK2	Q9H156	845 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ACBD3	Q9H3P7	528 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CACYBP	Q9HB71	228 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ESM1	Q9NQ30	184 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	FAM120C	Q9NX05	1096 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	TAS2R7	Q9NYW3	318 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	STOML1	Q9UBI4	398 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	MARCO	Q9UEW3	520 aa	Predicted RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	ZDHHC2	Q9UIJ5	367 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	EXO1	Q9UQ84	846 aa	Known RBP	5.19	□□□□□ -1.58
VARS-222	ENST00000470953	RNF115	Q9Y4L5	304 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	CCL27	Q9Y4X3	112 aa		5.19	□□□□□ -1.58
VARS-222	ENST00000470953	RNF103-CHMP3	A0A140T963	221 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	GXYLT2	A0PJZ3	443 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953		H0YC42	278 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953		H3BML4	177 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	C3orf84	H3BNL1	204 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	NDUFB5	O43674	189 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	ITM2A	O43736	263 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	TSPAN2	O60636	221 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	PPP1R3D	O95685	299 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	IL33	O95760	270 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	IFI6	P09912	130 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	LAMP1	P11279	417 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	G6PD	P11413	515 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	APEH	P13798	732 aa	Known RBP	5.18	□□□□□ -1.58
VARS-222	ENST00000470953	LBP	P18428	481 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	ME2	P23368	584 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	GCH1	P30793	250 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	CHI3L1	P36222	383 aa	Predicted RBP	5.18	□□□□□ -1.58
VARS-222	ENST00000470953	ETV4	P43268	484 aa		5.18	□□□□□ -1.58
VARS-222	ENST00000470953	CCT3	P49368	545 aa	Known RBP	5.18	□□□□□ -1.58
VARS-222	ENST00000470953	ANXA11	P50995	505 aa	Known RBP	5.18	□□□□□ -1.58

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