RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 F2RL1P55085 397 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 AGBL5Q8NDL9 886 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 OR51L1Q8NGJ5 315 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 L3HYPDHQ96EM0 354 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 BOD1Q96IK1 185 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 NMNAT1Q9HAN9 279 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 ASF1BQ9NVP2 202 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 NKX1-2Q9UD57 310 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 M0R3H8 397 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 WNT11O96014 354 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 DCNP07585 359 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 AKAIN1P0CW23 69 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 EDN3P14138 238 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 KITLGP21583 273 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 PKLRP30613 574 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 HTR5AP47898 357 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 LGALS4P56470 323 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZP2Q05996 745 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 MOGSQ13724 837 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 DUSP6Q16828 381 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 EXOSC6Q5RKV6 272 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 TMEM244Q5VVB8 128 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 WBP2NLQ6ICG8 309 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 GPR155Q7Z3F1 870 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 PDZD9Q8IXQ8 264 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 OR14A16Q8NHC5 309 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 FNDC9Q8TBE3 224 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZFAND1Q8TCF1 268 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 FOLH1BQ9HBA9 442 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZNF443Q9Y2A4 671 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 DDX60LQ5H9U9 1706 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 DVL2O14641 736 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SIGLEC6O43699 453 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 LAMP1P11279 417 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 TACR3P29371 465 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 IDH3GP51553 393 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 DCAF7P61962 342 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 MBTPS1Q14703 1052 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 NFATC4Q14934 902 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 MSMO1Q15800 293 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 KHDC1LQ5JSQ8 128 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 TANGO2Q6ICL3 276 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 FBXW12Q6X9E4 464 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SLC16A14Q7RTX9 510 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 MMP21Q8N119 569 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 MINDY1Q8N5J2 469 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 OR52B6Q8NGF0 335 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 H1FXQ92522 213 aaKnown RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 SLC25A31Q9H0C2 315 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 CNIH4Q9P003 139 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 TAAR2Q9P1P5 351 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 MYOTQ9UBF9 498 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 NPIPB15A6NHN6 443 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 ZNF891A8MT65 544 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 C12orf71A8MTZ7 269 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 ZBTB42B2RXF5 422 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SCAF4O95104 1147 aaKnown RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 OLFM2O95897 454 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 CCL11P51671 97 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SSTP61278 116 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SQSTM1Q13501 440 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 GK2Q14410 553 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 C15orf39Q6ZRI6 1047 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 ACBD4Q8NC06 268 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 C3orf58Q8NDZ4 430 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 OR5D16Q8NGK9 328 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SYNPRQ8TBG9 265 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 CNOT9Q92600 299 aaKnown RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 ZNF587Q96SQ5 575 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 PHF7Q9BWX1 381 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 RIMS3Q9UJD0 308 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 RNASET2O00584 256 aaKnown RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 SRPX2O60687 465 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 CPT2P23786 658 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 IL4RP24394 825 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 ZNF684Q5T5D7 378 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 PM20D1Q6GTS8 502 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 BRICD5Q6PL45 260 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 RBMXL3Q8N7X1 1067 aaKnown RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 CHDHQ8NE62 594 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 DTD2Q96FN9 168 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 INPP5KQ9BT40 448 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 MRI1Q9BV20 369 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 BTBD2Q9BX70 525 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 USP36Q9P275 1121 aaKnown RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 LRP5O75197 1615 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 DENRO43583 198 aaKnown RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 RAB3DO95716 219 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SLC2A1P11166 492 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 NR4A2P43354 598 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 ERVK-25P63136 954 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 SSX2Q16385 188 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 CDONQ4KMG0 1287 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 TMEFF1Q8IYR6 380 aa8.16□□□□□ -1.1
HPS4-209ENST00000466781 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
HPS4-209ENST00000466781 TMEM178AQ8NBL3 297 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms