RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 DRD2P14416 443 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 ARFIP1P53367 373 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 RRADP55042 308 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CASP9P55211 416 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 LIM2P55344 173 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SOX8P57073 446 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CD300CQ08708 224 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 AIMP2Q13155 320 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 GNA13Q14344 377 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 GANABQ14697 944 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 MAPK11Q15759 364 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 TSTQ16762 297 aaKnown RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 PLEKHN1Q494U1 663 aaPredicted RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 ATAD3BQ5T9A4 648 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 PRAMEF8Q5VWM4 474 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 PRAMEF7Q5VXH5 474 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 FCRLBQ6BAA4 426 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 CASP12Q6UXS9 341 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 LINC00696Q6ZRV3 163 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 ABHD13Q7L211 337 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 NDUFAF7Q7L592 441 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 C6orf120Q7Z4R8 191 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SNX29P2Q8IUI4 249 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 PROKR2Q8NFJ6 384 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 TTLQ8NG68 377 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 GPR32P1Q8NGA4 272 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 GAL3ST3Q96A11 431 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 RGMAQ96B86 450 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 OPALINQ96PE5 141 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 ZNF700Q9H0M5 742 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SIRT3Q9NTG7 399 aaPredicted RBP11.4□□□□□ -0.58
VRK3-202ENST00000377011 PLA2G3Q9NZ20 509 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 P2RX2Q9UBL9 471 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 PCDHGB6Q9Y5F9 930 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SNX8Q9Y5X2 465 aa11.4□□□□□ -0.58
VRK3-202ENST00000377011 SETXQ7Z333 2677 aaKnown RBP11.39□□□□□ -0.59
VRK3-202ENST00000377011 NSG1A0A0A6YYJ2 146 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 A8MUA0 341 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 GSTT2P0CG29 244 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 GSTT2BP0CG30 244 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 XKP51811 444 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 KLRB1Q12918 225 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 MLLT11Q13015 90 aaPredicted RBP11.39□□□□□ -0.59
VRK3-202ENST00000377011 MED22Q15528 200 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 SPDYE7PQ495Y7 208 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 SLC6A19Q695T7 634 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 PGBD2Q6P3X8 592 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 TMEM64Q6YI46 380 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 CPEB2Q7Z5Q1 589 aaKnown RBP11.39□□□□□ -0.59
VRK3-202ENST00000377011 OR2L5Q8NG80 312 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 OR9Q1Q8NGQ5 310 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 BBS10Q8TAM1 723 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 SFXN5Q8TD22 340 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 WDFY2Q96P53 400 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 IP6K3Q96PC2 410 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 OR5M11Q96RB7 305 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 POLDIP3Q9BY77 421 aaKnown RBP11.39□□□□□ -0.59
VRK3-202ENST00000377011 NUAK2Q9H093 628 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 DDX31Q9H8H2 851 aaKnown RBP11.39□□□□□ -0.59
VRK3-202ENST00000377011 BCL2L10Q9HD36 194 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 SLAMF7Q9NQ25 335 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 SACM1LQ9NTJ5 587 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 KCMF1Q9P0J7 381 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 PTGFRNQ9P2B2 879 aa11.39□□□□□ -0.59
VRK3-202ENST00000377011 IGKV3D-11A0A0A0MRZ8 115 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SLC35F4A4IF30 521 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 HMGN4O00479 90 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 CYR61O00622 381 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 ENTPD6O75354 484 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 IGHEP01854 428 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 HSMCR30P0CW71 290 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 POU2F1P14859 743 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 CASRP41180 1078 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 KHKP50053 298 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 C1DQ13901 141 aaKnown RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 NSDHLQ15738 373 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SSX1Q16384 188 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 TMEM35AQ53FP2 167 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 JMJD6Q6NYC1 403 aaPredicted RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 CYP4Z2PQ8N1L4 340 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 FAM26EQ8N5C1 309 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 TBC1D19Q8N5T2 526 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 TEX19Q8NA77 164 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 PLPP5Q8NEB5 264 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 DOK4Q8TEW6 326 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 NACC2Q96BF6 587 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 MOAP1Q96BY2 351 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 TMCO6Q96DC7 493 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 PTCHD1Q96NR3 888 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SLC30A2Q9BRI3 323 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 HOXD1Q9GZZ0 328 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 POLR2J3Q9H1A7 115 aaKnown RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 NDUFB11Q9NX14 153 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SLC9A8Q9Y2E8 581 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 NTNG1Q9Y2I2 539 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 GRIP1Q9Y3R0 1128 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 LRRK2Q5S007 2527 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 OR10H3O60404 316 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 UGT2B17O75795 530 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 KCNK2O95069 426 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms