RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TMEM43Q9BTV4 400 aa15.95■□□□□ 0.14
NEK3-206ENST00000611833 RANGRFQ9HD47 186 aaPredicted RBP15.95■□□□□ 0.14
NEK3-206ENST00000611833 SIGLEC7Q9Y286 467 aa15.95■□□□□ 0.14
NEK3-206ENST00000611833 LRP4O75096 1905 aa15.95■□□□□ 0.14
NEK3-206ENST00000611833 FAM240BA0A1B0GVZ2 78 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 BRINP1O60477 761 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 MT-ND5P03915 603 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 CHRNB1P11230 501 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 CTBP2P56545 445 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 CSTF1Q05048 431 aaKnown RBP15.94■□□□□ 0.14
NEK3-206ENST00000611833 ABI3BPQ7Z7G0 1075 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 BAHD1Q8TBE0 780 aaPredicted RBP15.94■□□□□ 0.14
NEK3-206ENST00000611833 KISS1RQ969F8 398 aaPredicted RBP15.94■□□□□ 0.14
NEK3-206ENST00000611833 ZNF559Q9BR84 538 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 NDC1Q9BTX1 674 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 BEX2Q9BXY8 128 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 C14orf105Q9NVL8 296 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 A0A0B4J293 547 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 FAM47E-STBD1D6RA91 191 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 LYRM1O43325 122 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 HRO43593 1189 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 F8A1P23610 371 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 CD83Q01151 205 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 ADAM15Q13444 863 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 HTR4Q13639 388 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 Q6ZSR6 202 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 GLCCI1Q86VQ1 547 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 CSNK1A1LQ8N752 337 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 RSC1A1Q92681 617 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 RNF31Q96EP0 1072 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 FYTTD1Q96QD9 318 aaKnown RBP15.94■□□□□ 0.14
NEK3-206ENST00000611833 TIMP4Q99727 224 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 TCEAL2Q9H3H9 227 aaPredicted RBP15.94■□□□□ 0.14
NEK3-206ENST00000611833 SYNDIG1Q9H7V2 258 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 INPP5EQ9NRR6 644 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 STARD5Q9NSY2 213 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 HRASLS2Q9NWW9 162 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 USP36Q9P275 1121 aaKnown RBP15.94■□□□□ 0.14
NEK3-206ENST00000611833 EXTL2Q9UBQ6 330 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 FBXL21Q9UKT6 434 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 CLCA3PQ9Y6N3 262 aa15.94■□□□□ 0.14
NEK3-206ENST00000611833 GALR3O60755 368 aaPredicted RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 ELK1P19419 428 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 NOS3P29474 1203 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 MLLT3P42568 568 aaPredicted RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 VSX2P58304 361 aaPredicted RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 PLAURQ03405 335 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 MGAT2Q10469 447 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 TATDN3Q17R31 274 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 ZNF57Q68EA5 555 aaPredicted RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 ZNF613Q6PF04 617 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 ZC3H14Q6PJT7 736 aaKnown RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 CA13Q8N1Q1 262 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 CCDC3Q9BQI4 270 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 MEPEQ9NQ76 525 aaPredicted RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 NLKQ9UBE8 527 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 CPNE7Q9UBL6 633 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 SLC35A3Q9Y2D2 325 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 ENTPD2Q9Y5L3 495 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 SGK494L7N484 410 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 ZNF3P17036 446 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 HLA-DMAP28067 261 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 SHC1P29353 583 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 PPP1CAP62136 330 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 SLC3A1Q07837 685 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 RIN1Q13671 783 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 SF3A2Q15428 464 aaKnown RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 RNF44Q7L0R7 432 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 ZAR1Q86SH2 424 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 NR2C2APQ86WQ0 139 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 SLC22A18ASQ8N1D0 253 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 FRMD1Q8N878 549 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 OR52R1Q8NGF1 315 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 RPLP0P6Q8NHW5 317 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 CNOT9Q92600 299 aaKnown RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 PMM1Q92871 262 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 ZC3HAV1LQ96H79 300 aaKnown RBP15.93■□□□□ 0.14
NEK3-206ENST00000611833 SLC28A3Q9HAS3 691 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 PIAS3Q9Y6X2 628 aa15.93■□□□□ 0.14
NEK3-206ENST00000611833 A0A0J9YY10 115 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 J3QLW9 94 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 HCRTR1O43613 425 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 OR10H2O60403 315 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 RFPL3O75679 317 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 PPP1R3DO95685 299 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 CLUP10909 449 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 ZNF19P17023 458 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 AKT2P31751 481 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 MAP3K8P41279 467 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 YPEL5P62699 121 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 CDK10Q15131 360 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 MANEAQ5SRI9 462 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 HBMQ6B0K9 141 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 OAFQ86UD1 273 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 NOXA1Q86UR1 476 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 GPALPP1Q8IXQ4 340 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 ASCC1Q8N9N2 400 aaKnown RBP15.92■□□□□ 0.14
NEK3-206ENST00000611833 CYB561A3Q8NBI2 242 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 OR13H1Q8NG92 308 aa15.92■□□□□ 0.14
NEK3-206ENST00000611833 C4orf36Q96KX1 117 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms