RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 MXD4Q14582 209 aaPredicted RBP2.49□□□□□ -2.01
LSM6-205ENST00000507449 KIAA0040Q15053 153 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 OR2B11Q5JQS5 317 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 TTC23Q5W5X9 447 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 FAM43BQ6ZT52 329 aaPredicted RBP2.49□□□□□ -2.01
LSM6-205ENST00000507449 APOBEC3FQ8IUX4 373 aaKnown RBP2.49□□□□□ -2.01
LSM6-205ENST00000507449 UBQLNLQ8IYU4 475 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 SLC38A6Q8IZM9 456 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 SPAG16Q8N0X2 631 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 CEND1Q8N111 149 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 C15orf54Q8N8G6 183 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 OR2A12Q8NGT7 310 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 AENQ8WTP8 325 aaKnown RBP2.49□□□□□ -2.01
LSM6-205ENST00000507449 PELI1Q96FA3 418 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 TTC25Q96NG3 672 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 ZNF607Q96SK3 696 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 ZSCAN5AQ9BUG6 496 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 RNF126Q9BV68 326 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 CHIAQ9BZP6 476 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 AATFQ9NY61 560 aaKnown RBP eCLIP2.49□□□□□ -2.01
LSM6-205ENST00000507449 OR1A1Q9P1Q5 309 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 TMCC3Q9ULS5 477 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 CLEC4EQ9ULY5 219 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 SCML2Q9UQR0 700 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 MRPS33Q9Y291 106 aaKnown RBP2.49□□□□□ -2.01
LSM6-205ENST00000507449 FLVCR1Q9Y5Y0 555 aa2.49□□□□□ -2.01
LSM6-205ENST00000507449 MBLAC1A4D2B0 266 aaPredicted RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 PRRG1O14668 218 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 IGKV3-15P01624 115 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 UGT2B4P06133 528 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 STSP08842 583 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 KRTAP1-4P0C5Y4 121 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 CCDC166P0CW27 439 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 GCFC2P16383 781 aaKnown RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 SERPINA2P20848 420 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 CHI3L1P36222 383 aaPredicted RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 DHPSP49366 369 aaPredicted RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 HNMTP50135 292 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 HSPA2P54652 639 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 RIPPLY3P57055 190 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 OTUD4Q01804 1114 aaKnown RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 CSTF1Q05048 431 aaKnown RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 TATDN3Q17R31 274 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 ANKDD1AQ495B1 522 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 OR5M10Q6IEU7 315 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 ZBED8Q8IZ13 594 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 CLDN19Q8N6F1 224 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 ARL6IP6Q8N6S5 226 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 KIR3DL3Q8N743 410 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 ANKFN1Q8N957 763 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 CATSPER1Q8NEC5 780 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 OR52M1Q8NGK5 317 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 ZNF564Q8TBZ8 553 aaPredicted RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 CTNNBL1Q8WYA6 563 aaPredicted RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 SERAC1Q96JX3 654 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 TXN2Q99757 166 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 OMDQ99983 421 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 CRACR2AQ9BSW2 395 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 TEX13BQ9BXU2 312 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 POLR1EQ9GZS1 481 aaKnown RBP2.48□□□□□ -2.01
LSM6-205ENST00000507449 RHBGQ9H310 441 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 Q9H3A6 140 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 TMEM9Q9P0T7 183 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 ONECUT1Q9UBC0 465 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 KLHL21Q9UJP4 597 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 TP53TG3Q9ULZ0 132 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 PDE10AQ9Y233 779 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 RASD1Q9Y272 281 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 WDR45Q9Y484 360 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 ABCA7Q8IZY2 2146 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 KDRP35968 1356 aa2.48□□□□□ -2.01
LSM6-205ENST00000507449 NOTCH3Q9UM47 2321 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 IGHV2-70DA0A0C4DH43 119 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 A0A1B0GWB2 263 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 A0A1W2PNV4 684 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 VSTM2BA6NLU5 285 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 ZFP92A6NM28 416 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 DHRS7CA6NNS2 312 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 B4DXG7 233 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 H0YCG3 227 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 WWP2O00308 870 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 CPLX1O14810 134 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 TAPBPO15533 448 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 KIAA0754O94854 1291 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 ADCY5O95622 1261 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 HSPB1P04792 205 aaKnown RBP2.47□□□□□ -2.01
LSM6-205ENST00000507449 H2BFMP0C1H6 154 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 PRG2P13727 222 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 VDAC1P21796 283 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 PCMT1P22061 227 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 MMP11P24347 488 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 LAP3P28838 519 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 PRKAR2BP31323 418 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 UGT1A3P35503 534 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 P2RY1P47900 373 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 EFNA3P52797 238 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 AP3M2P53677 418 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 UBE2HP62256 183 aa2.47□□□□□ -2.01
LSM6-205ENST00000507449 RPS14P62263 151 aaKnown RBP2.47□□□□□ -2.01
LSM6-205ENST00000507449 NDPQ00604 133 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms