RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SKP1P63208 163 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 PROKR2Q8NFJ6 384 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 OR2T33Q8NG76 320 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 NUDT22Q9BRQ3 303 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 LRRN3Q9H3W5 708 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 TMEM27Q9HBJ8 222 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 CBLCQ9ULV8 474 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 A0A0B4J2E0 115 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 A0A1B0GX12 115 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 METTL15A6NJ78 407 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 KDM4EB2RXH2 506 aaPredicted RBP13.89□□□□□ -0.19
GPC3-202ENST00000394299 PRAMEF2O60811 474 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 SAGP10523 405 aaPredicted RBP13.89□□□□□ -0.19
GPC3-202ENST00000394299 TGM4P49221 684 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 HSD11B2P80365 405 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 ZNF404Q494X3 552 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 PERM1Q5SV97 790 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 PLBD1Q6P4A8 553 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 TMPRSS9Q7Z410 1059 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 LAPTM4BQ86VI4 370 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 FANK1Q8TC84 345 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 CD180Q99467 661 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 OR8D2Q9GZM6 311 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 Q9N2J8 555 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 ATXN7L1Q9ULK2 861 aaPredicted RBP13.89□□□□□ -0.19
GPC3-202ENST00000394299 CRYBB2P43320 205 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 PRKCDQ05655 676 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 KIRREL2Q6UWL6 708 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 PHC2Q8IXK0 858 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 HS6ST2Q96MM7 605 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 FAM210AQ96ND0 272 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 TNFRSF13CQ96RJ3 184 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 KLHDC3Q9BQ90 382 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 NRSN2Q9GZP1 204 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 FBXO8Q9NRD0 319 aa13.89□□□□□ -0.19
GPC3-202ENST00000394299 CDC14CA4D256 554 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 NPIPB9F8W1W9 429 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 H0YIG0 161 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 NUDT21O43809 227 aaKnown RBP13.88□□□□□ -0.19
GPC3-202ENST00000394299 LALBAP00709 142 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 LIMS3P0CW19 117 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 LIMS4P0CW20 117 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 DHPSP49366 369 aaPredicted RBP13.88□□□□□ -0.19
GPC3-202ENST00000394299 KLHL22Q53GT1 634 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 ALG10BQ5I7T1 473 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 Q6ZNX1 250 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 SHISA6Q6ZSJ9 500 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 PRR22Q8IZ63 422 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 KCNS3Q9BQ31 491 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 ZNF559Q9BR84 538 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 RAB33BQ9H082 229 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 RACGAP1Q9H0H5 632 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 DUSP15Q9H1R2 295 aaPredicted RBP13.88□□□□□ -0.19
GPC3-202ENST00000394299 HMG20AQ9NP66 347 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 POLE3Q9NRF9 147 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 MED31Q9Y3C7 131 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 SPIN1Q9Y657 262 aaPredicted RBP13.88□□□□□ -0.19
GPC3-202ENST00000394299 HEATR5AQ86XA9 2040 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 C17orf51A8MQB3 221 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 OIP5O43482 229 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 IFI6P09912 130 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 GLB1P16278 677 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 ATP12AP54707 1039 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 EPHA4P54764 986 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 TUBA1BP68363 451 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 RAB40BQ12829 278 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 MED25Q71SY5 747 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 TUBA1AQ71U36 451 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 LRRC17Q8N6Y2 441 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 TOR1AIP2Q8NFQ8 470 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 SMAP2Q8WU79 429 aaPredicted RBP13.88□□□□□ -0.19
GPC3-202ENST00000394299 ZNF524Q96C55 264 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 MESP1Q9BRJ9 268 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 MRPS18AQ9NVS2 196 aaKnown RBP13.88□□□□□ -0.19
GPC3-202ENST00000394299 GALNT8Q9NY28 637 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 FBXL4Q9UKA2 621 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
GPC3-202ENST00000394299 BHLHE40O14503 412 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 GMFGO60234 142 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 FMO6PO60774 539 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 CLUP10909 449 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 RPS19P39019 145 aaKnown RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 RANBP1P43487 201 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 FGFBP1Q14512 234 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 ZNF141Q15928 474 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 WDR45BQ5MNZ6 344 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 ZNF613Q6PF04 617 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 RNF113BQ8IZP6 322 aaKnown RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 IFT27Q9BW83 186 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 NXF5Q9H1B4 397 aaKnown RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 TPK1Q9H3S4 243 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 FGF20Q9NP95 211 aaPredicted RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.87□□□□□ -0.19
GPC3-202ENST00000394299 MUTYHQ9UIF7 546 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 SMIM30A4D0T7 59 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 PLD2O14939 933 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 DUX1O43812 170 aa13.87□□□□□ -0.19
GPC3-202ENST00000394299 CSTAP01040 98 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms