RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CYP27C1Q4G0S4 372 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 EIPR1Q53HC9 387 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 C1orf185Q5T7R7 199 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 SAXO2Q658L1 398 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 TMEM81Q6P7N7 255 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 YRDCQ86U90 279 aaKnown RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 CCDC71Q8IV32 467 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 ULK2Q8IYT8 1036 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 ASB5Q8WWX0 329 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 NEURL3Q96EH8 262 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 FAM120BQ96EK7 910 aaKnown RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 RAB3IPQ96QF0 476 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 THUMPD3Q9BV44 507 aaKnown RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 UBQLN3Q9H347 655 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 RAD21L1Q9H4I0 556 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 KAT8Q9H7Z6 458 aaKnown RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 C3orf14Q9HBI5 128 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 CD300AQ9UGN4 299 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 CBLCQ9ULV8 474 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 RNF6Q9Y252 685 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 SNX8Q9Y5X2 465 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 CBR3O75828 277 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 HOXD4P09016 255 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-225ENST00000569245 GLI4P10075 376 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 HSD17B1P14061 328 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 SOAT1P35610 550 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 CHI3L1P36222 383 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-225ENST00000569245 PTGDSP41222 190 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 MVDP53602 400 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 PRR5P85299 388 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 CEACAM7Q14002 265 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 WIPI1Q5MNZ9 446 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-225ENST00000569245 OR5M10Q6IEU7 315 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 BHLHB9Q6PI77 547 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 C6orf120Q7Z4R8 191 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 SERPINA11Q86U17 422 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 PLCZ1Q86YW0 608 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 FAM83FQ8NEG4 500 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-225ENST00000569245 OR56A1Q8NGH5 318 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 OR14L1PQ8NHC6 308 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 GPR151Q8TDV0 419 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 TIMP4Q99727 224 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 TTYH2Q9BSA4 534 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 ZCCHC3Q9NUD5 404 aaKnown RBP13.18□□□□□ -0.3
COMMD4-225ENST00000569245 CAMK2AQ9UQM7 478 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 WIF1Q9Y5W5 379 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 GTF3C1Q12789 2109 aa13.18□□□□□ -0.3
COMMD4-225ENST00000569245 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 PRORSD1PA6NEY8 169 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 FAM90A27PA6NNH2 459 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 FAM47E-STBD1D6RA91 191 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 ANKRD65E5RJM6 399 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 SCO2O43819 266 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 PSMG1O95456 288 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 C1QCP02747 245 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 CYP4B1P13584 511 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 ME2P23368 584 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 PTGER4P35408 488 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 CLK3P49761 638 aaKnown RBP13.17□□□□□ -0.3
COMMD4-225ENST00000569245 GZMMP51124 257 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 PSMD4P55036 377 aaKnown RBP13.17□□□□□ -0.3
COMMD4-225ENST00000569245 TXNL4AP83876 142 aaKnown RBP13.17□□□□□ -0.3
COMMD4-225ENST00000569245 LIPEQ05469 1076 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 FADDQ13158 208 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 RGNQ15493 299 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 FXNQ16595 210 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 SPDYE7PQ495Y7 208 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 RTL6Q6ICC9 239 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 CALHM3Q86XJ0 350 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 CLEC4FQ8N1N0 589 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 NUP43Q8NFH3 380 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 OR5AK3PQ8NH89 298 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 SLC9A6Q92581 669 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-225ENST00000569245 DTNBP1Q96EV8 351 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 ZNF583Q96ND8 569 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 ECSITQ9BQ95 431 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 LMF2Q9BU23 707 aaKnown RBP13.17□□□□□ -0.3
COMMD4-225ENST00000569245 SPATA9Q9BWV2 254 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 TRIM8Q9BZR9 551 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 ALG2Q9H553 416 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 KCNJ16Q9NPI9 418 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 GPATCH2Q9NW75 528 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 FAM215AQ9Y5M1 114 aa13.17□□□□□ -0.3
COMMD4-225ENST00000569245 TEX15Q9BXT5 2789 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 EML6Q6ZMW3 1958 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 GXYLT2A0PJZ3 443 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 AHRRA9YTQ3 701 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 C19orf84I3L1E1 186 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 PDE5AO76074 875 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 IL33O95760 270 aa13.16□□□□□ -0.3
COMMD4-225ENST00000569245 BMP2P12643 396 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms