RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NOXRED1Q6NXP6 359 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 SLC48A1Q6P1K1 146 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 IL20RBQ6UXL0 311 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TMEM64Q6YI46 380 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 HSDL2Q6YN16 418 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 GALNTL5Q7Z4T8 443 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 MDGA2Q7Z553 956 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 HPS6Q86YV9 775 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 SLC15A3Q8IY34 581 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 PRR22Q8IZ63 422 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ST13P4Q8IZP2 240 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 CYP4Z2PQ8N1L4 340 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TMEM156Q8N614 296 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 CPSF7Q8N684 471 aaKnown RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 ZNF781Q8N8C0 355 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 GBP7Q8N8V2 638 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 MORN4Q8NDC4 146 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 MDS2Q8NDY4 140 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 OR4K14Q8NGD5 310 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 OR9A2Q8NGT5 310 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 CEP70Q8NHQ1 597 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 MBD3L2Q8NHZ7 208 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 SUN3Q8TAQ9 357 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 GRHL3Q8TE85 626 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 HAS2Q92819 552 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 KAT2AQ92830 837 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 DAZLQ92904 295 aaKnown RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 CNRIP1Q96F85 164 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 PGM2Q96G03 612 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 SENP5Q96HI0 755 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 FBXL20Q96IG2 436 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 MAGED4Q96JG8 741 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 EGLN2Q96KS0 407 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 C3orf30Q96M34 536 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 C5orf34Q96MH7 638 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TSSK3Q96PN8 268 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 RASL10BQ96S79 203 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 C20orf27Q9GZN8 174 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 MEGF9Q9H1U4 602 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 LRTM1Q9HBL6 345 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TMBIM4Q9HC24 238 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 G6PC2Q9NQR9 355 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ABI3Q9P2A4 366 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 BCAP29Q9UHQ4 241 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 UTS2RQ9UKP6 389 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 CES1P1Q9UKY3 287 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 C19orf53Q9UNZ5 99 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ERVK-11Q9UQG0 969 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 DTX4Q9Y2E6 619 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 DNAJC15Q9Y5T4 150 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 FLNBO75369 2602 aaKnown RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 MAST4O15021 2626 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 TRAV17A0A0B4J275 112 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 PINLYPA6NC86 204 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 F5H697 171 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SLC28A1O00337 649 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 LSM1O15116 133 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 TM9SF1O15321 606 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 RGS14O43566 566 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 PEX11AO75192 247 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 GUCY1B2O75343 617 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 ERN1O75460 977 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 SLC25A12O75746 678 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 RSL1D1O76021 490 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 ZWINTO95229 277 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 GPANK1O95872 356 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 IGKV3-11P04433 115 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SERPINE1P05121 402 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SP1P08047 785 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SLC35E2P0CK97 266 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 PORP16435 677 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 SDC1P18827 310 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 PPIFP30405 207 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 APOBEC3AP31941 199 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 SLC1A6P48664 564 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 CYB561P49447 251 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 HLCSP50747 726 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 NR0B1P51843 470 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 SLC37A1P57057 533 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 KCNK10P57789 538 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 ABCE1P61221 599 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 NAA20P61599 178 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 ZNF763Q0D2J5 394 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 BST1Q10588 318 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 DYRK1AQ13627 763 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 UGT3A2Q3SY77 523 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 RFTN2Q52LD8 501 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 TRMT12Q53H54 448 aaKnown RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 TTMPQ5BVD1 217 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 C6orf163Q5TEZ5 329 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SLC25A25Q6KCM7 469 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 CLEC9AQ6UXN8 241 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 Q6ZSR9 355 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 SLC29A4Q7RTT9 530 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 WDR53Q7Z5U6 358 aaPredicted RBP4.48□□□□□ -1.69
VPS41-205ENST00000414632 TICAM1Q8IUC6 712 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 CLYBLQ8N0X4 340 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 CNPY4Q8N129 248 aa4.48□□□□□ -1.69
VPS41-205ENST00000414632 LRRC25Q8N386 305 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms