RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 EXOSC7Q15024 291 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF77Q15935 545 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ACSM3Q53FZ2 586 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF542PQ5EBM4 170 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF793Q6ZN11 406 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ASPGQ86U10 573 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SDR9C7Q8NEX9 313 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR4M1Q8NGD0 313 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR8D4Q8NGM9 314 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR2T35Q8NGX2 323 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TMEM239Q8WW34 195 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TSACCQ96A04 125 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC6A18Q96N87 628 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SDHCQ99643 169 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 GINS4Q9BRT9 223 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RSPH9Q9H1X1 276 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 MIXL1Q9H2W2 232 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 UBQLN3Q9H347 655 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 EPHX3Q9H6B9 360 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MTHFD2LQ9H903 347 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC25A19Q9HC21 320 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 NANSQ9NR45 359 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SIRT3Q9NTG7 399 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 PLEKHB1Q9UF11 243 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 NDOR1Q9UHB4 597 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PCYT1BQ9Y5K3 369 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 CDH10Q9Y6N8 788 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 LAMA2P24043 3122 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 TRBV2A0A0J9YWF9 115 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TMEM129A0AVI4 362 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SERTM1A2A2V5 107 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TRAPPC13A5PLN9 417 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC22A31A6NKX4 558 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TMEM229AB2RXF0 380 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 H0YC42 278 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 B4GALT2O60909 372 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 LALBAP00709 142 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MT-ND4P03905 459 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 LIMS3P0CW19 117 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 LIMS4P0CW20 117 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PVRP15151 417 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TEAD1P28347 426 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 EPHA5P54756 1037 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR12D2P58182 307 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 C21orf58P58505 322 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SHC2P98077 582 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 BIKQ13323 160 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PON3Q15166 354 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 IRF4Q15306 451 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 POU4F3Q15319 338 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 HYAL4Q2M3T9 481 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 DEFB110Q30KQ9 67 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 GXYLT1Q4G148 440 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PRRT3Q5FWE3 981 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TMEM31Q5JXX7 168 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 HES5Q5TA89 166 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 C1orf94Q6P1W5 598 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ABHD17CQ6PCB6 329 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PRR23CQ6ZRP0 262 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 QSOX2Q6ZRP7 698 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RASSF6Q6ZTQ3 369 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 FAM220AQ7Z4H9 259 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 GDF7Q7Z4P5 450 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 FBXL6Q8N531 539 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ZNF655Q8N720 491 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 TMEM99Q8N816 258 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SIMC1Q8NDZ2 872 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR7G1Q8NGA0 311 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR13C5Q8NGS8 318 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RPLP0P6Q8NHW5 317 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ELP4Q96EB1 424 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CHFRQ96EP1 664 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MRPL48Q96GC5 212 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 NARS2Q96I59 477 aaKnown RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 HYLS1Q96M11 299 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 HSPA12BQ96MM6 686 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 HS6ST2Q96MM7 605 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SIGLEC11Q96RL6 698 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SLC25A18Q9H1K4 315 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 OR10A4Q9H209 315 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 C6orf106Q9H6K1 298 aaPredicted RBP4.43□□□□□ -1.7
USP44-201ENST00000258499 FOLH1BQ9HBA9 442 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 STARD5Q9NSY2 213 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 FKBP14Q9NWM8 211 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ICKQ9UPZ9 632 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CHST2Q9Y4C5 530 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 FKBP7Q9Y680 259 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ZSWIM8A7E2V4 1837 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TRDV1A0A1B0GX56 115 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MAN2B1O00754 1011 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 RNF13O43567 381 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SEMA7AO75326 666 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ARL6IP5O75915 188 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CXCL10P02778 98 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 SYPP08247 313 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 MSL3P1P0C860 447 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 CTSEP14091 401 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 PRKCAP17252 672 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 ITPKBP27987 946 aa4.43□□□□□ -1.7
USP44-201ENST00000258499 TRHRP34981 398 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms