RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MAGEB3O15480 346 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 GPAA1O43292 621 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 ZNF354AO60765 605 aaPredicted RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 UFL1O94874 794 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 ADCY5O95622 1261 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 PRG2P13727 222 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 PGAM2P15259 253 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 XRCC1P18887 633 aaPredicted RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 BCL3P20749 454 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 ATP6V1C1P21283 382 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 CSRP3P50461 194 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 NOVA1P51513 510 aaKnown RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 RGS1Q08116 209 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 RUNX3Q13761 415 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 TIMM50Q3ZCQ8 353 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 ANKDD1AQ495B1 522 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 TCTEX1D4Q5JR98 221 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 RABGAP1LQ5R372 815 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 C2orf66Q6UXQ4 117 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 PPP1R42Q7Z4L9 355 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 CDC20BQ86Y33 519 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 MCOLN2Q8IZK6 566 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 Q8N9G6 341 aaPredicted RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 OR2T34Q8NGX1 318 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 NANPQ8TBE9 248 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 PNPT1Q8TCS8 783 aaKnown RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 RLN3Q8WXF3 142 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 C18orf25Q96B23 403 aaPredicted RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 TMEM80Q96HE8 168 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 FOXN4Q96NZ1 517 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 TMEM121Q9BTD3 319 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 DUSP16Q9BY84 665 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 POLR1EQ9GZS1 481 aaKnown RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 GLT8D2Q9H1C3 349 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 UTP6Q9NYH9 597 aaKnown RBP3.1□□□□□ -1.91
SMC4-225ENST00000497203 AIPL1Q9NZN9 384 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 ANAPC7Q9UJX3 599 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 WDR45Q9Y484 360 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 METP08581 1390 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 POGZQ7Z3K3 1410 aa3.1□□□□□ -1.91
SMC4-225ENST00000497203 OR6C65A6NJZ3 312 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 SRRM5B3KS81 715 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 BCAS1O75363 584 aaPredicted RBP3.09□□□□□ -1.91
SMC4-225ENST00000497203 KIAA0754O94854 1291 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 SLC2A10O95528 541 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 UMPSP11172 480 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 RPA2P15927 270 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 TBXA2RP21731 343 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 IDSP22304 550 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 GATA2P23769 480 aaPredicted RBP3.09□□□□□ -1.91
SMC4-225ENST00000497203 NF2P35240 595 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 MAGEA5P43359 124 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 XCR1P46094 333 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 PAX2Q02962 417 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 CD47Q08722 323 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 PJVKQ0ZLH3 352 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 PEX6Q13608 980 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 MESDQ14696 234 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 CHI3L2Q15782 390 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 Q1RN00 199 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 CFAP157Q5JU67 520 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 METTL11BQ5VVY1 283 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 CES3Q6UWW8 571 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 BAIAP2L2Q6UXY1 529 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 CYS1Q717R9 158 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 LYG1Q8N1E2 194 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 SPEM1Q8N4L4 309 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 CSNK1A1LQ8N752 337 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 IPMKQ8NFU5 416 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 RHOXF1Q8NHV9 184 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 SENP8Q96LD8 212 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 OMDQ99983 421 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 TM2D1Q9BX74 207 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 TMEM117Q9H0C3 514 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 RPS10P5Q9NQ39 176 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 RSPH14Q9UHP6 348 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 GSTK1Q9Y2Q3 226 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 MAD1L1Q9Y6D9 718 aa3.09□□□□□ -1.91
SMC4-225ENST00000497203 ESYT2A0FGR8 921 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 MBLAC1A4D2B0 266 aaPredicted RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 E9PLD3 99 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 ZSCAN12O43309 604 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 BCL2L11O43521 198 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 OR1F1O43749 312 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 TPST2O60704 377 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 IGF1P05019 195 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 UGT2B4P06133 528 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 CD55P08174 381 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 NT5EP21589 574 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 DHPSP49366 369 aaPredicted RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 PPT1P50897 306 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 SLC25A1P53007 311 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 PLA2G16P53816 162 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 CBX1P83916 185 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 CNTN2Q02246 1040 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 RIPPLY1Q0D2K3 151 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 ZNF154Q13106 437 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 SERTAD2Q14140 314 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 SELPLGQ14242 412 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 KCNJ11Q14654 390 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms