RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NR2F6P10588 404 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FGF5P12034 268 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 GYPEP15421 78 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CCKBRP32239 447 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CSTF2P33240 577 aaKnown RBP eCLIP3.3□□□□□ -1.88
MCF2-202ENST00000370573 MSX2P35548 267 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 FEN1P39748 380 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 ETV5P41161 510 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FRKP42685 505 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 GSTM5P46439 218 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 TRPC1P48995 793 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RASSF2P50749 326 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 EFNA3P52797 238 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RAB38P57729 211 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 HBA1P69905 142 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SHC2P98077 582 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 E2F1Q01094 437 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 MC2RQ01718 297 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 TNFRSF17Q02223 184 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ID2Q02363 134 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 NHLH1Q02575 133 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ACY1Q03154 408 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FOXM1Q08050 763 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 TRA2AQ13595 282 aaKnown RBP eCLIP3.3□□□□□ -1.88
MCF2-202ENST00000370573 NDUFA9Q16795 377 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FAM214AQ32MH5 1076 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RUNDC3AQ59EK9 446 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RABL3Q5HYI8 236 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ANXA8L1Q5VT79 327 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 C1orf189Q5VU69 101 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 LCN10Q6JVE6 187 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SLC48A1Q6P1K1 146 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 DHRS13Q6UX07 377 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 C16orf89Q6UX73 402 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RBM44Q6ZP01 1051 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 MSANTD1Q6ZTZ1 278 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 DHDDSQ86SQ9 333 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 GLRX5Q86SX6 157 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SLC15A3Q8IY34 581 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 PGAM4Q8N0Y7 254 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 C10orf111Q8N326 155 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 TTC29Q8NA56 475 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 GOT1L1Q8NHS2 421 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 SUN3Q8TAQ9 357 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ANKRD9Q96BM1 317 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 ROPN1LQ96C74 230 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FAM120BQ96EK7 910 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 MMABQ96EY8 250 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 CNRIP1Q96F85 164 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 AURKBQ96GD4 344 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 ZNF764Q96H86 408 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 ITCHQ96J02 903 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CGREF1Q99674 301 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 THTPAQ9BU02 230 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FAIM2Q9BWQ8 316 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 AKIRIN1Q9H9L7 192 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 SLC35C2Q9NQQ7 365 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.3□□□□□ -1.88
MCF2-202ENST00000370573 GID8Q9NWU2 228 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CHCHD3Q9NX63 227 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 EHD3Q9NZN3 535 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 TMEM181Q9P2C4 612 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CD300AQ9UGN4 299 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 PHF11Q9UIL8 331 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 UTS2RQ9UKP6 389 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 USP22Q9UPT9 525 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CLDN16Q9Y5I7 305 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SNX8Q9Y5X2 465 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 A0A1W2PRB8 838 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 C1orf226A1L170 272 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CDHR4A6H8M9 788 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 PRORSD1PA6NEY8 169 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 A8MUI8 341 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 GTPBP1O00178 669 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 RNASET2O00584 256 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 RFXANKO14593 260 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 DSCR3O14972 297 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FGF17O60258 216 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 LDB3O75112 727 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 GUCY1B2O75343 617 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ERN1O75460 977 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 PDE5AO76074 875 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 MT-CO3P00414 261 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 NPPAP01160 153 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 ZCCHC18P0CG32 403 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RNH1P13489 461 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 ZNF10P21506 573 aaPredicted RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 SLC5A2P31639 672 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RPL3P39023 403 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 AVPR1BP47901 424 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 CDK9P50750 372 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 GZMMP51124 257 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 XKP51811 444 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 SLC7A2P52569 658 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 FOXL2P58012 376 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 MTPNP58546 118 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RAC3P60763 192 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 RPS3AP61247 264 aaKnown RBP3.3□□□□□ -1.88
MCF2-202ENST00000370573 BTG2P78543 158 aa3.3□□□□□ -1.88
MCF2-202ENST00000370573 MS4A2Q01362 244 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms