RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 WDR43Q15061 677 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATP2A3-211ENST00000572176 RPGRQ92834 1020 aaKnown RBP16.86■□□□□ 0.29
ATP2A3-211ENST00000572176 PSMD1Q99460 953 aa16.86■□□□□ 0.29
ATP2A3-211ENST00000572176 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
ATP2A3-211ENST00000572176 COL4A5P29400 1685 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 NEUROD2Q15784 382 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 CC2D2BQ6DHV5 1058 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 C3orf67Q6ZVT6 689 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 PPP1R42Q7Z4L9 355 aa16.85■□□□□ 0.29
ATP2A3-211ENST00000572176 KRT24Q2M2I5 525 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 CHADLQ6NUI6 762 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 SYNE4Q8N205 404 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 CRAMP1Q96RY5 1269 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 PRKRIP1Q9H875 184 aaPredicted RBP16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 RNF123Q5XPI4 1314 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 PCNTO95613 3336 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
ATP2A3-211ENST00000572176 FZD9O00144 591 aa16.83■□□□□ 0.28
ATP2A3-211ENST00000572176 LAMB2P55268 1798 aa16.83■□□□□ 0.28
ATP2A3-211ENST00000572176 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
ATP2A3-211ENST00000572176 RBM17Q96I25 401 aaKnown RBP16.83■□□□□ 0.28
ATP2A3-211ENST00000572176 UTP14AQ9BVJ6 771 aaKnown RBP16.83■□□□□ 0.28
ATP2A3-211ENST00000572176 TAF1DQ9H5J8 278 aaPredicted RBP16.83■□□□□ 0.28
ATP2A3-211ENST00000572176 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
ATP2A3-211ENST00000572176 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 HOXB7P09629 217 aa16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 SLC51AQ86UW1 340 aa16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
ATP2A3-211ENST00000572176 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
ATP2A3-211ENST00000572176 NLRP3Q96P20 1036 aa16.81■□□□□ 0.28
ATP2A3-211ENST00000572176 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
ATP2A3-211ENST00000572176 NLRP10Q86W26 655 aa16.8■□□□□ 0.28
ATP2A3-211ENST00000572176 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
ATP2A3-211ENST00000572176 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
ATP2A3-211ENST00000572176 LAS1LQ9Y4W2 734 aaKnown RBP16.8■□□□□ 0.28
ATP2A3-211ENST00000572176 ABCC4O15439 1325 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 GPC2Q8N158 579 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 JDP2Q8WYK2 163 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 LTBP1Q14766 1721 aa16.79■□□□□ 0.28
ATP2A3-211ENST00000572176 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
ATP2A3-211ENST00000572176 DDX60Q8IY21 1712 aaKnown RBP16.78■□□□□ 0.28
ATP2A3-211ENST00000572176 EPHX2P34913 555 aa16.77■□□□□ 0.28
ATP2A3-211ENST00000572176 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
ATP2A3-211ENST00000572176 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 ZNF853P0CG23 659 aa16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 HCLS1P14317 486 aaPredicted RBP16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 EIF6P56537 245 aaKnown RBP16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 EAPPQ56P03 285 aaPredicted RBP16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 LARGE2Q8N3Y3 721 aa16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 PLBD2Q8NHP8 589 aa16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 MBIPQ9NS73 344 aa16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 DBF4Q9UBU7 674 aaPredicted RBP16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 LRRC37AA6NMS7 1700 aa16.76■□□□□ 0.27
ATP2A3-211ENST00000572176 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
ATP2A3-211ENST00000572176 PNMA8AQ86V59 439 aaPredicted RBP16.75■□□□□ 0.27
ATP2A3-211ENST00000572176 APAF1O14727 1248 aa16.74■□□□□ 0.27
ATP2A3-211ENST00000572176 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
ATP2A3-211ENST00000572176 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
ATP2A3-211ENST00000572176 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
ATP2A3-211ENST00000572176 IFT57Q9NWB7 429 aa16.74■□□□□ 0.27
ATP2A3-211ENST00000572176 DUOX1Q9NRD9 1551 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 PPIP5K2O43314 1243 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 BBOX1O75936 387 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 SCNN1DP51172 638 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 AOC3Q16853 763 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 ANKRD13DQ6ZTN6 518 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 NIM1KQ8IY84 436 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 GJA3Q9Y6H8 435 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 CNTNAP1P78357 1384 aa16.73■□□□□ 0.27
ATP2A3-211ENST00000572176 TAF1P21675 1872 aa16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 GRAPQ13588 217 aa16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 DDX46Q7L014 1031 aaKnown RBP16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
ATP2A3-211ENST00000572176 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
ATP2A3-211ENST00000572176 GNAI1P63096 354 aa16.71■□□□□ 0.27
ATP2A3-211ENST00000572176 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
ATP2A3-211ENST00000572176 SUPT20HQ8NEM7 779 aa16.71■□□□□ 0.27
ATP2A3-211ENST00000572176 CLEC11AQ9Y240 323 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms