RNA–Protein interactions for RNA: ENST00000483809.1

HBP1-211, Transcript of HMG-box transcription factor 1, human

TSL 2

Gene HBP1, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HBP1-211	ENST00000483809	FAM13A	O94988	1023 aa		7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	EPB42	P16452	691 aa		7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	GRN	P28799	593 aa	Known RBP	7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	SRSF11	Q05519	484 aa	Known RBP	7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	ECM1	Q16610	540 aa		7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	CEP63	Q96MT8	703 aa		7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	AVEN	Q9NQS1	362 aa	Predicted RBP	7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	FAM13B	Q9NYF5	915 aa		7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	MARK1	Q9P0L2	795 aa		7.15	□□□□□ -1.26
HBP1-211	ENST00000483809	EGFR	P00533	1210 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	SLURP2	P0DP57	97 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	MAP2K3	P46734	347 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	ALKBH2	Q6NS38	261 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	CNTNAP3B	Q96NU0	1288 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	CNTNAP3	Q9BZ76	1288 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	STRN4	Q9NRL3	753 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	KCNH4	Q9UQ05	1017 aa		7.14	□□□□□ -1.27
HBP1-211	ENST00000483809	SOWAHD	A6NJG2	315 aa		7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	ZBTB39	O15060	712 aa		7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	MX2	P20592	715 aa		7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	MPST	P25325	297 aa		7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	ZAP70	P43403	619 aa		7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	SFSWAP	Q12872	951 aa	Known RBP	7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	NOM1	Q5C9Z4	860 aa	Known RBP	7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	IVNS1ABP	Q9Y6Y0	642 aa		7.13	□□□□□ -1.27
HBP1-211	ENST00000483809	C2CD2L	O14523	706 aa		7.12	□□□□□ -1.27
HBP1-211	ENST00000483809	ABL1	P00519	1130 aa		7.12	□□□□□ -1.27
HBP1-211	ENST00000483809	EIF1AX	P47813	144 aa	Known RBP	7.12	□□□□□ -1.27
HBP1-211	ENST00000483809	CTBS	Q01459	385 aa		7.12	□□□□□ -1.27
HBP1-211	ENST00000483809	ZNF211	Q13398	564 aa	Predicted RBP	7.12	□□□□□ -1.27
HBP1-211	ENST00000483809	IGF1R	P08069	1367 aa		7.11	□□□□□ -1.27
HBP1-211	ENST00000483809		H3BRB1	525 aa		7.11	□□□□□ -1.27
HBP1-211	ENST00000483809	ARAF	P10398	606 aa		7.11	□□□□□ -1.27
HBP1-211	ENST00000483809	MTMR3	Q13615	1198 aa		7.11	□□□□□ -1.27
HBP1-211	ENST00000483809	GLYCTK	Q8IVS8	523 aa		7.11	□□□□□ -1.27
HBP1-211	ENST00000483809	TUT1	Q9H6E5	874 aa	Known RBP	7.11	□□□□□ -1.27
HBP1-211	ENST00000483809	LRRC4B	Q9NT99	713 aa		7.11	□□□□□ -1.27
HBP1-211	ENST00000483809	KCNMB2	Q9Y691	235 aa		7.11	□□□□□ -1.27
HBP1-211	ENST00000483809	BMP4	P12644	408 aa		7.1	□□□□□ -1.27
HBP1-211	ENST00000483809	CD33	P20138	364 aa		7.1	□□□□□ -1.27
HBP1-211	ENST00000483809	MZF1	P28698	734 aa	Predicted RBP	7.1	□□□□□ -1.27
HBP1-211	ENST00000483809	ARHGAP4	P98171	946 aa		7.1	□□□□□ -1.27
HBP1-211	ENST00000483809	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.1	□□□□□ -1.27
HBP1-211	ENST00000483809	GSX2	Q9BZM3	304 aa		7.1	□□□□□ -1.27
HBP1-211	ENST00000483809	RTCB	Q9Y3I0	505 aa	Known RBP	7.1	□□□□□ -1.27
HBP1-211	ENST00000483809	FZD6	O60353	706 aa		7.09	□□□□□ -1.27
HBP1-211	ENST00000483809	RPLP1	P05386	114 aa	Known RBP	7.09	□□□□□ -1.27
HBP1-211	ENST00000483809	SPEM2	Q0P670	501 aa		7.09	□□□□□ -1.27
HBP1-211	ENST00000483809	PIK3R5	Q8WYR1	880 aa		7.09	□□□□□ -1.27
HBP1-211	ENST00000483809	SIN3B	O75182	1162 aa		7.08	□□□□□ -1.28
HBP1-211	ENST00000483809	ADAMTS2	O95450	1211 aa		7.08	□□□□□ -1.28
HBP1-211	ENST00000483809	CCIN	Q13939	588 aa		7.08	□□□□□ -1.28
HBP1-211	ENST00000483809	SLC30A3	Q99726	388 aa		7.08	□□□□□ -1.28
HBP1-211	ENST00000483809	MDFI	Q99750	246 aa		7.08	□□□□□ -1.28
HBP1-211	ENST00000483809	ANO2	Q9NQ90	1003 aa		7.08	□□□□□ -1.28
HBP1-211	ENST00000483809	GDF2	Q9UK05	429 aa	Predicted RBP	7.08	□□□□□ -1.28
HBP1-211	ENST00000483809	MAP3K6	O95382	1288 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	PDGFA	P04085	211 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	USP5	P45974	858 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	NEUROD1	Q13562	356 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	GRIN2C	Q14957	1233 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	TRIP4	Q15650	581 aa	Predicted RBP	7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	XKR5	Q6UX68	686 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	SLCO4C1	Q6ZQN7	724 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	AEBP1	Q8IUX7	1158 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	RGL4	Q8IZJ4	473 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	GJD3	Q8N144	294 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	GOLGA6L1	Q8N7Z2	621 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	TNFRSF25	Q93038	417 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	CITED4	Q96RK1	184 aa		7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.07	□□□□□ -1.28
HBP1-211	ENST00000483809	HOXD8	P13378	290 aa	Predicted RBP	7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	ADH6	P28332	368 aa		7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	ZNF385C	Q66K41	422 aa	Predicted RBP	7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	ATCAY	Q86WG3	371 aa		7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	GPR152	Q8TDT2	470 aa		7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	WHAMM	Q8TF30	809 aa		7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	ACD	Q96AP0	544 aa		7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	NUDT16	Q96DE0	195 aa	Known RBP	7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	KLF15	Q9UIH9	416 aa		7.06	□□□□□ -1.28
HBP1-211	ENST00000483809	ADARB2-AS1	A8MUL3	147 aa		7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	XYLB	O75191	536 aa		7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	EHHADH	Q08426	723 aa		7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	PDE12	Q6L8Q7	609 aa	Known RBP	7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.05	□□□□□ -1.28	3e-6	■■■□□ 15.1
HBP1-211	ENST00000483809	SYT9	Q86SS6	491 aa		7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	CMTR1	Q8N1G2	835 aa	Known RBP	7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	EDEM1	Q92611	657 aa		7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.05	□□□□□ -1.28
HBP1-211	ENST00000483809	PCSK2	P16519	638 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	NLRP13	Q86W25	1043 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	SVOP	Q8N4V2	548 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	FAM129B	Q96TA1	746 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	RBCK1	Q9BYM8	510 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	CCDC87	Q9NVE4	849 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	PRR12	Q9ULL5	1215 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	POLI	Q9UNA4	740 aa		7.04	□□□□□ -1.28
HBP1-211	ENST00000483809	USP20	Q9Y2K6	914 aa		7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms