RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 CRY2Q49AN0 593 aa16.26■□□□□ 0.19
YIPF3-203ENST00000416380 NBPF5PQ86XG9 351 aaPredicted RBP16.26■□□□□ 0.19
YIPF3-203ENST00000416380 CNBD1Q8NA66 436 aa16.26■□□□□ 0.19
YIPF3-203ENST00000416380 DNAAF4Q8WXU2 420 aa16.26■□□□□ 0.19
YIPF3-203ENST00000416380 MYD88Q99836 296 aa16.26■□□□□ 0.19
YIPF3-203ENST00000416380 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
YIPF3-203ENST00000416380 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
YIPF3-203ENST00000416380 CHRNA5P30532 468 aa16.25■□□□□ 0.19
YIPF3-203ENST00000416380 FKBP5Q13451 457 aaPredicted RBP16.25■□□□□ 0.19
YIPF3-203ENST00000416380 CWF19L2Q2TBE0 894 aaKnown RBP16.25■□□□□ 0.19
YIPF3-203ENST00000416380 TPTE2Q6XPS3 522 aa16.25■□□□□ 0.19
YIPF3-203ENST00000416380 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
YIPF3-203ENST00000416380 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
YIPF3-203ENST00000416380 PTPRCP08575 1304 aa16.24■□□□□ 0.19
YIPF3-203ENST00000416380 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
YIPF3-203ENST00000416380 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
YIPF3-203ENST00000416380 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
YIPF3-203ENST00000416380 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
YIPF3-203ENST00000416380 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
YIPF3-203ENST00000416380 BRCA1P38398 1863 aaKnown RBP16.24■□□□□ 0.19
YIPF3-203ENST00000416380 COL4A1P02462 1669 aa16.24■□□□□ 0.19
YIPF3-203ENST00000416380 H7C1W4 665 aa16.23■□□□□ 0.19
YIPF3-203ENST00000416380 SRGNP10124 158 aa16.23■□□□□ 0.19
YIPF3-203ENST00000416380 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
YIPF3-203ENST00000416380 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
YIPF3-203ENST00000416380 NYXQ9GZU5 481 aa16.23■□□□□ 0.19
YIPF3-203ENST00000416380 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
YIPF3-203ENST00000416380 DLEC1Q9Y238 1755 aa16.23■□□□□ 0.19
YIPF3-203ENST00000416380 DDX60Q8IY21 1712 aaKnown RBP16.22■□□□□ 0.19
YIPF3-203ENST00000416380 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.192e-8■■■■□ 22.5
YIPF3-203ENST00000416380 GCKRQ14397 625 aa16.22■□□□□ 0.19
YIPF3-203ENST00000416380 PPP1R42Q7Z4L9 355 aa16.22■□□□□ 0.19
YIPF3-203ENST00000416380 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
YIPF3-203ENST00000416380 ARHGAP45Q92619 1136 aa16.22■□□□□ 0.19
YIPF3-203ENST00000416380 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-203ENST00000416380 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-203ENST00000416380 JARID2Q92833 1246 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-203ENST00000416380 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
YIPF3-203ENST00000416380 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-203ENST00000416380 TRMT112Q9UI30 125 aaKnown RBP16.21■□□□□ 0.19
YIPF3-203ENST00000416380 UTYO14607 1347 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 ABCC4O15439 1325 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 SH3TC1Q8TE82 1336 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 SNED1Q8TER0 1413 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
YIPF3-203ENST00000416380 SLC51AQ86UW1 340 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 C2CD5Q86YS7 1000 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 C7orf43Q8WVR3 580 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
YIPF3-203ENST00000416380 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
YIPF3-203ENST00000416380 TRIM27P14373 513 aa16.19■□□□□ 0.18
YIPF3-203ENST00000416380 PDE6BP35913 854 aa16.19■□□□□ 0.18
YIPF3-203ENST00000416380 ST5P78524 1137 aa16.19■□□□□ 0.18
YIPF3-203ENST00000416380 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
YIPF3-203ENST00000416380 LAMB2P55268 1798 aa16.18■□□□□ 0.18
YIPF3-203ENST00000416380 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
YIPF3-203ENST00000416380 IRS4O14654 1257 aaPredicted RBP16.17■□□□□ 0.18
YIPF3-203ENST00000416380 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
YIPF3-203ENST00000416380 STYK1Q6J9G0 422 aa16.17■□□□□ 0.18
YIPF3-203ENST00000416380 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
YIPF3-203ENST00000416380 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
YIPF3-203ENST00000416380 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
YIPF3-203ENST00000416380 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
YIPF3-203ENST00000416380 H0YIN7 160 aa16.16■□□□□ 0.18
YIPF3-203ENST00000416380 RLBP1P12271 317 aa16.16■□□□□ 0.18
YIPF3-203ENST00000416380 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
YIPF3-203ENST00000416380 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-203ENST00000416380 EPHA10Q5JZY3 1008 aa16.16■□□□□ 0.18
YIPF3-203ENST00000416380 INTS3Q68E01 1043 aaKnown RBP16.16■□□□□ 0.18
YIPF3-203ENST00000416380 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
YIPF3-203ENST00000416380 MASTLQ96GX5 879 aa16.16■□□□□ 0.18
YIPF3-203ENST00000416380 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
YIPF3-203ENST00000416380 CSF1RP07333 972 aa16.15■□□□□ 0.18
YIPF3-203ENST00000416380 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
YIPF3-203ENST00000416380 NPR1P16066 1061 aa16.15■□□□□ 0.18
YIPF3-203ENST00000416380 FOXO4P98177 505 aa16.15■□□□□ 0.18
YIPF3-203ENST00000416380 API5Q9BZZ5 524 aaKnown RBP16.15■□□□□ 0.18
YIPF3-203ENST00000416380 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
YIPF3-203ENST00000416380 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
YIPF3-203ENST00000416380 GRM8O00222 908 aa16.14■□□□□ 0.17
YIPF3-203ENST00000416380 PRELPP51888 382 aa16.14■□□□□ 0.17
YIPF3-203ENST00000416380 SLC4A10Q6U841 1118 aa16.14■□□□□ 0.17
YIPF3-203ENST00000416380 UBE3BQ7Z3V4 1068 aa16.14■□□□□ 0.17
YIPF3-203ENST00000416380 CRAMP1Q96RY5 1269 aa16.14■□□□□ 0.17
YIPF3-203ENST00000416380 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
YIPF3-203ENST00000416380 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
YIPF3-203ENST00000416380 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
YIPF3-203ENST00000416380 NLRP3Q96P20 1036 aa16.13■□□□□ 0.17
YIPF3-203ENST00000416380 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
YIPF3-203ENST00000416380 PDE8AO60658 829 aa16.12■□□□□ 0.17
YIPF3-203ENST00000416380 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
YIPF3-203ENST00000416380 DALRD3Q5D0E6 543 aaKnown RBP16.12■□□□□ 0.17
YIPF3-203ENST00000416380 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
YIPF3-203ENST00000416380 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
YIPF3-203ENST00000416380 TTLL6Q8N841 843 aa16.12■□□□□ 0.17
YIPF3-203ENST00000416380 ARFGEF1Q9Y6D6 1849 aa16.11■□□□□ 0.17
YIPF3-203ENST00000416380 CCT4P50991 539 aaKnown RBP16.11■□□□□ 0.17
YIPF3-203ENST00000416380 ZKSCAN2Q63HK3 967 aa16.11■□□□□ 0.17
YIPF3-203ENST00000416380 ANKRD44Q8N8A2 993 aa16.11■□□□□ 0.17
YIPF3-203ENST00000416380 SUCLG2Q96I99 432 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms