RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	RNF138	Q8WVD3	245 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	SLC9A6	Q92581	669 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	C19orf24	Q9BVV8	132 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	SHARPIN	Q9H0F6	387 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	BRF2	Q9HAW0	419 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	LRTM1	Q9HBL6	345 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	WHRN	Q9P202	907 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	TMCO1	Q9UM00	188 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	NFU1	Q9UMS0	254 aa		12.69	□□□□□ -0.38
RC3H2-208	ENST00000478216	FAM234B	A2RU67	622 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	STX16-NPEPL1	H3BU86	382 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	UBFD1	O14562	309 aa	Known RBP	12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	STX16	O14662	325 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	ANGPTL1	O95841	491 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	DANCR	P0C864	163 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	PYGB	P11216	843 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	ZNF17	P17021	662 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	TSPAN8	P19075	237 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	ZNF41	P51814	821 aa	Predicted RBP	12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	CASP9	P55211	416 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	PSG6	Q00889	435 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	BSPH1	Q075Z2	132 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	C17orf67	Q0P5P2	114 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	HEPACAM	Q14CZ8	416 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	NRF1	Q16656	503 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	HBM	Q6B0K9	141 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	RPS27L	Q71UM5	84 aa	Known RBP	12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	GALNT10	Q86SR1	603 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	CREG2	Q8IUH2	290 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	BANP	Q8N9N5	519 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	OR2V1	Q8NHB1	315 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	KISS1R	Q969F8	398 aa	Predicted RBP	12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	ADAD1	Q96M93	576 aa	Known RBP	12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	HDHD5	Q9BXW7	423 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	RTN4R	Q9BZR6	473 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	SLC35C2	Q9NQQ7	365 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	DDX18	Q9NVP1	670 aa	Known RBP	12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	FBXO34	Q9NWN3	711 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	VPS29	Q9UBQ0	182 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	LPAR3	Q9UBY5	353 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	MCM8	Q9UJA3	840 aa		12.68	□□□□□ -0.38
RC3H2-208	ENST00000478216	IGHV4-30-2	A0A087WSY4	118 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	PLOD3	O60568	738 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	UTS2	O95399	124 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	JUN	P05412	331 aa	Known RBP	12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	RBP1	P09455	135 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	IL11	P20809	199 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	PTN	P21246	168 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	MAGEA4	P43358	317 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	NCBP2	P52298	156 aa	Known RBP eCLIP	12.67	□□□□□ -0.38	2e-11	■■■■■ 31
RC3H2-208	ENST00000478216	PLTP	P55058	493 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	CDH11	P55287	796 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	TAB1	Q15750	504 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	STK11	Q15831	433 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	TMEM249	Q2WGJ8	235 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	LETMD1	Q6P1Q0	360 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	TMEM107	Q6UX40	140 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	CDYL2	Q8N8U2	506 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	HSD17B8	Q92506	261 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	ERP44	Q9BS26	406 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	EBPL	Q9BY08	206 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	POTEKP	Q9BYX7	375 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	C3orf14	Q9HBI5	128 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	MIEF1	Q9NQG6	463 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	CISD1	Q9NZ45	108 aa	Known RBP	12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	RNF14	Q9UBS8	474 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	SAR1B	Q9Y6B6	198 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	ROS1	P08922	2347 aa		12.67	□□□□□ -0.38
RC3H2-208	ENST00000478216	OR4F21	O95013	312 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	KCNH1	O95259	989 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	NTN1	O95631	604 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	IL33	O95760	270 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	KRT6A	P02538	564 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	KRT6B	P04259	564 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	PABPC4L	P0CB38	370 aa	Known RBP	12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	ADH6	P28332	368 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	KRT6C	P48668	564 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	CDH13	P55290	713 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	ACSM2A	Q08AH3	577 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	PGGHG	Q32M88	737 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	ACSM2B	Q68CK6	577 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	MFSD12	Q6NUT3	480 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	ESPNL	Q6ZVH7	1005 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	ATG4D	Q86TL0	474 aa	Predicted RBP	12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	GATS	Q8NAP1	163 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	OR2W6P	Q8NHA6	318 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	ROBO4	Q8WZ75	1007 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	C11orf24	Q96F05	449 aa	Predicted RBP	12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	RNF145	Q96MT1	663 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	GPR78	Q96P69	363 aa		12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216	DMGDH	Q9UI17	866 aa	Known RBP	12.66	□□□□□ -0.38
RC3H2-208	ENST00000478216		A0A087WZY1	265 aa		12.65	□□□□□ -0.38
RC3H2-208	ENST00000478216	FAM187A	A6NFU0	413 aa		12.65	□□□□□ -0.38
RC3H2-208	ENST00000478216	ADA	P00813	363 aa		12.65	□□□□□ -0.38
RC3H2-208	ENST00000478216	ZNF16	P17020	682 aa	Predicted RBP	12.65	□□□□□ -0.38
RC3H2-208	ENST00000478216	SRD5A1	P18405	259 aa		12.65	□□□□□ -0.38
RC3H2-208	ENST00000478216	HMOX2	P30519	316 aa		12.65	□□□□□ -0.38
RC3H2-208	ENST00000478216	NTS	P30990	170 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms