RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 MED22Q15528 200 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 BTBD16Q32M84 506 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 TOR2AQ5JU69 321 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 PRAMEF8Q5VWM4 474 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 PRAMEF7Q5VXH5 474 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 C12orf73Q69YU5 71 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 LAMTOR1Q6IAA8 161 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 FAM111BQ6SJ93 734 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 NLGN4YQ8NFZ3 816 aaPredicted RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 OR4M2Q8NGB6 313 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 CRELD1Q96HD1 420 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 PRRC1Q96M27 445 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SRRQ9GZT4 340 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 CNOT2Q9NZN8 540 aaKnown RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 MMP17Q9ULZ9 603 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 GPR55Q9Y2T6 319 aaPredicted RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 FCMRO60667 390 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 TNFP01375 233 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ALPPP05187 535 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 PSKH1P11801 424 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 PVRP15151 417 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SSTR4P31391 388 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 KIR2DL3P43628 341 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ALDH6A1Q02252 535 aaKnown RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 IQCHQ86VS3 1027 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ATCAYQ86WG3 371 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SLC22A18ASQ8N1D0 253 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 LRRC25Q8N386 305 aaPredicted RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 MORN4Q8NDC4 146 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 OR4K14Q8NGD5 310 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SETD6Q8TBK2 473 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ADAMTS15Q8TE58 950 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 GPA33Q99795 319 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 CDCA4Q9BXL8 241 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 EXOSC4Q9NPD3 245 aaKnown RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 RABL2AQ9UBK7 228 aaPredicted RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 NDOR1Q9UHB4 597 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 PHF11Q9UIL8 331 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 LIPT1Q9Y234 373 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SCN2AQ99250 2005 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 C2CD4DB7Z1M9 353 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 SHOXO15266 292 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 FRS3O43559 492 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 B3GALT2O43825 422 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 NOS1APO75052 506 aaPredicted RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 RPS5P46782 204 aaKnown RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 LSSP48449 732 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 SSX1Q16384 188 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 ESCO2Q56NI9 601 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 PLAG1Q6DJT9 500 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 IQCF1Q8N6M8 205 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 TCEANCQ8N8B7 351 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 SLC16A11Q8NCK7 471 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 C12orf4Q9NQ89 552 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 CPNE7Q9UBL6 633 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 SLC23A1Q9UHI7 598 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 DAPP1Q9UN19 280 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 MRPS2Q9Y399 296 aaKnown RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 CCDC182A6NF36 153 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 SHISA7A6NL88 538 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 ZIC2O95409 532 aaPredicted RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 IGHV4-34P06331 123 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 GZMKP49863 264 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 PDX1P52945 283 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 FBXO43Q4G163 708 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 C1orf94Q6P1W5 598 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 TMPRSS11AQ6ZMR5 421 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 BCDIN3DQ7Z5W3 292 aaKnown RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 MEX3DQ86XN8 651 aaKnown RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 C9orf43Q8TAL5 461 aaPredicted RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 GPBAR1Q8TDU6 330 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 DOK4Q8TEW6 326 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 FAM3CQ92520 227 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 POLMQ9NP87 494 aaPredicted RBP13.05□□□□□ -0.32
MSH5-202ENST00000375740 EVA1BQ9NVM1 165 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 TVP23BQ9NYZ1 205 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 CFL2Q9Y281 166 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 CHST2Q9Y4C5 530 aa13.05□□□□□ -0.32
MSH5-202ENST00000375740 LRP4O75096 1905 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 URADA6NGE7 173 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 H0YGG7 62 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 CELA2BP08218 269 aaPredicted RBP13.04□□□□□ -0.32
MSH5-202ENST00000375740 TRAPPC2P0DI81 140 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 TRAPPC2BP0DI82 140 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 TLX1P31314 330 aaPredicted RBP13.04□□□□□ -0.32
MSH5-202ENST00000375740 NUDT1P36639 197 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ARF3P61204 181 aaPredicted RBP13.04□□□□□ -0.32
MSH5-202ENST00000375740 COX10Q12887 443 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 CCINQ13939 588 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 MFSD12Q6NUT3 480 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 CD300LDQ6UXZ3 194 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms