RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 WDR45Q9Y484 360 aa23.84■■□□□ 1.41
RAB40C-201ENST00000248139 A0A0B4J293 547 aa23.84■■□□□ 1.41
RAB40C-201ENST00000248139 STK25O00506 426 aa23.84■■□□□ 1.41
RAB40C-201ENST00000248139 POLR1CO15160 346 aaPredicted RBP23.84■■□□□ 1.41
RAB40C-201ENST00000248139 MFSD12Q6NUT3 480 aa23.84■■□□□ 1.41
RAB40C-201ENST00000248139 RNF31Q96EP0 1072 aa23.84■■□□□ 1.41
RAB40C-201ENST00000248139 ATP13A2Q9NQ11 1180 aa23.84■■□□□ 1.41
RAB40C-201ENST00000248139 ZNF443Q9Y2A4 671 aaPredicted RBP23.84■■□□□ 1.41
RAB40C-201ENST00000248139 C5orf67F2Z3F1 127 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 SYT5O00445 386 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 APODP05090 189 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 CPN2P22792 545 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 GABRA5P31644 462 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 KIR2DL3P43628 341 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 FAM214AQ32MH5 1076 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 PLBD1Q6P4A8 553 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 XKRXQ6PP77 449 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 ZNF836Q6ZNA1 936 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 PRSS41Q7RTY9 318 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 MRGPREQ86SM8 312 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 PFN4Q8NHR9 129 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 ADAP2Q9NPF8 381 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 PLSCR3Q9NRY6 295 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 KLHL28Q9NXS3 571 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 CBLCQ9ULV8 474 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 EXOSC1Q9Y3B2 195 aaKnown RBP23.83■■□□□ 1.41
RAB40C-201ENST00000248139 DOCK8Q8NF50 2099 aa23.83■■□□□ 1.41
RAB40C-201ENST00000248139 ARHGEF17Q96PE2 2063 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-201ENST00000248139 LDB3O75112 727 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 CNIH2Q6PI25 160 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 ENPP7Q6UWV6 458 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 WDR88Q6ZMY6 472 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 FGF14Q92915 247 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 TP53INP1Q96A56 240 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 SENP5Q96HI0 755 aaPredicted RBP23.83■■□□□ 1.4
RAB40C-201ENST00000248139 ZNF649Q9BS31 505 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 HCAR1Q9BXC0 346 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 RAB11FIP5Q9BXF6 653 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 C20orf141Q9NUB4 165 aa23.83■■□□□ 1.4
RAB40C-201ENST00000248139 CTSVO60911 334 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 EIF2S1P05198 315 aaKnown RBP23.82■■□□□ 1.4
RAB40C-201ENST00000248139 GCGRP47871 477 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 CSTF1Q05048 431 aaKnown RBP23.82■■□□□ 1.4
RAB40C-201ENST00000248139 RUNX2Q13950 521 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 PGGHGQ32M88 737 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 FBXO42Q6P3S6 717 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 ZNF620Q6ZNG0 422 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 OR10G6Q8NH81 332 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 CHAC2Q8WUX2 184 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 PRRG3Q9BZD7 231 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 IL20Q9NYY1 176 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 ZNF624Q9P2J8 865 aaPredicted RBP23.82■■□□□ 1.4
RAB40C-201ENST00000248139 GSTK1Q9Y2Q3 226 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 PRR19A6NJB7 356 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 SNTNA6NMZ2 147 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 ADH1BP00325 375 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 RFX3P48380 749 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 ABATP80404 500 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 VASNQ6EMK4 673 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 PARM1Q6UWI2 310 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 OR1E3Q8WZA6 343 aa23.82■■□□□ 1.4
RAB40C-201ENST00000248139 SMAD5Q99717 465 aaKnown RBP23.82■■□□□ 1.4
RAB40C-201ENST00000248139 RANGRFQ9HD47 186 aaPredicted RBP23.82■■□□□ 1.4
RAB40C-201ENST00000248139 MRPS2Q9Y399 296 aaKnown RBP23.82■■□□□ 1.4
RAB40C-201ENST00000248139 GPR89AB7ZAQ6 455 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 GABRPO00591 440 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 ZGLP1P0C6A0 271 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 GPR89BP0CG08 455 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 FZD5Q13467 585 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 ZFP69Q49AA0 526 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 ZNF628Q5EBL2 1059 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 PAMR1Q6UXH9 720 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 LRRC25Q8N386 305 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-201ENST00000248139 POGLUT1Q8NBL1 392 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 NEIL3Q8TAT5 605 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 MOAP1Q96BY2 351 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 SLC22A4Q9H015 551 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 SIRT4Q9Y6E7 314 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-201ENST00000248139 A0A1B0GVC2 190 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 CCDC182A6NF36 153 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 A6NIN4 97 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 TTC36A6NLP5 189 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 B4DXG7 233 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 PEX12O00623 359 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 FPR3P25089 353 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 MRPS15P82914 257 aaKnown RBP23.81■■□□□ 1.4
RAB40C-201ENST00000248139 PAQR7Q86WK9 346 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 SFTPA2Q8IWL1 248 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 OSTF1Q92882 214 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 TRIM45Q9H8W5 580 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-201ENST00000248139 B3GAT2Q9NPZ5 323 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 SNX7Q9UNH6 387 aa23.81■■□□□ 1.4
RAB40C-201ENST00000248139 LOC105369274A0A096LPK9 316 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 LOC102723532A0A0G2JNH3 316 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 PRSS38A1L453 326 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 MBOAT2Q6ZWT7 520 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 OR4N4Q8N0Y3 316 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 FAM181AQ8N9Y4 354 aa23.8■■□□□ 1.4
RAB40C-201ENST00000248139 SRFBP1Q8NEF9 429 aaKnown RBP23.8■■□□□ 1.4
RAB40C-201ENST00000248139 GRIP1Q9Y3R0 1128 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms