RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TTTY12Q9BZ98 90 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 MYLK2Q9H1R3 596 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 OLAHQ9NV23 265 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 CNIH4Q9P003 139 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 VAPAQ9P0L0 249 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 MRTO4Q9UKD2 239 aaKnown RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 ARL2BPQ9Y2Y0 163 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 UBR5O95071 2799 aaPredicted RBP10.12□□□□□ -0.79
UBE4B-210ENST00000488228 GTF3C1Q12789 2109 aa10.12□□□□□ -0.79
UBE4B-210ENST00000488228 CENPVL1A0A0U1RR11 272 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 LOC100653049A0A140TA62 436 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 PRAMEF27A3QJZ7 478 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 FXYD1O00168 92 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ADAM10O14672 748 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 GNB5O14775 395 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 MRASO14807 208 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 TFECO14948 347 aaPredicted RBP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 SLC22A2O15244 555 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ASNA1O43681 348 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 CCDC22O60826 627 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 KRT34O76011 436 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 WISP2O76076 250 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 UNC5CO95185 931 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 KRT75O95678 551 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 FAM107AO95990 144 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ETFAP13804 333 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 CNR1P21554 472 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 CRATP43155 626 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 MASP1P48740 699 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 PSMD4P55036 377 aaKnown RBP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 MTPNP58546 118 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 PLGLB1Q02325 96 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 C19orf57Q0VDD7 668 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 FOXO1Q12778 655 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 SELPLGQ14242 412 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 MAPRE2Q15555 327 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 TRMT5Q32P41 509 aaKnown RBP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 FNDC7Q5VTL7 733 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 DLEU7Q6UYE1 221 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 HMGN2P46Q86SG4 172 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 C10orf111Q8N326 155 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 DPP10Q8N608 796 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ANKFN1Q8N957 763 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 GATSQ8NAP1 163 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ZFP62Q8NB50 900 aaPredicted RBP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 POGLUT1Q8NBL1 392 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 FAM110BQ8TC76 370 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 RNF138Q8WVD3 245 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 XAGE5Q8WWM1 108 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 NR4A3Q92570 626 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 RCN3Q96D15 328 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 TMCO6Q96DC7 493 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 CCDC106Q9BWC9 280 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ANGPTL4Q9BY76 406 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 RTN4RQ9BZR6 473 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ZNF703Q9H7S9 590 aaPredicted RBP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 RYDENQ9NUL5 291 aaKnown RBP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 MRGBPQ9NV56 204 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 BOKQ9UMX3 212 aaPredicted RBP10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ABCG2Q9UNQ0 655 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 WIF1Q9Y5W5 379 aa10.11□□□□□ -0.79
UBE4B-210ENST00000488228 ESPL1Q14674 2120 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TENM4Q6N022 2769 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 ANKRD33BA6NCL7 494 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 DUXAA6NLW8 204 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 BBIP1A8MTZ0 92 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 B4DXG7 233 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 NPIPA5E9PKD4 350 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 CLIC1O00299 241 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 KIAA0513O60268 411 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 FADS1O60427 444 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TRIM3O75382 744 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TNFRSF21O75509 655 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 GLSO94925 669 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 OXSR1O95747 527 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 CRYABP02511 175 aaKnown RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 CHRM4P08173 479 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 CELA3AP09093 270 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 NUDT7P0C024 238 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 RFPL3SP0C7P2 107 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 COX4I1P13073 169 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 ATP6V1C1P21283 382 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 DCTP40126 519 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 MAGEA5P43359 124 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TDGF1P3P51864 188 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 GAS1P54826 345 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 DSTNP60981 165 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 PPIAP62937 165 aaKnown RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 HPCAP84074 193 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 HSF1Q00613 529 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 ALDH6A1Q02252 535 aaKnown RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 IGFBP7Q16270 282 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 SYPL1Q16563 259 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 MMEL1Q495T6 779 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 FLYWCH1Q4VC44 716 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TBCELQ5QJ74 424 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 ATAD3BQ5T9A4 648 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 GKAP1Q5VSY0 366 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms