RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 FGFBP1Q14512 234 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 GSTA3Q16772 222 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ZSWIM7Q19AV6 140 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 SLC25A35Q3KQZ1 300 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 NSUN5P2Q63ZY6 315 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 OR2A2Q6IF42 318 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 CDC73Q6P1J9 531 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 MSANTD1Q6ZTZ1 278 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TRIML2Q8N7C3 387 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 OR2T11Q8NH01 316 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 MIPOL1Q8TD10 442 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 GPR151Q8TDV0 419 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ADAMTS15Q8TE58 950 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 KAT2AQ92830 837 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ABTB1Q969K4 478 aaPredicted RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 TMBIM1Q969X1 311 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TSSK3Q96PN8 268 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ADOQ96SZ5 270 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TIMP4Q99727 224 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TM9SF2Q99805 663 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TTYH2Q9BSA4 534 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 DUSP26Q9BV47 211 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 MECRQ9BV79 373 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 BTBD2Q9BX70 525 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 EBPLQ9BY08 206 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ACTRT3Q9BYD9 372 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 DPY30Q9C005 99 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 OR2B2Q9GZK3 357 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 ENKD1Q9H0I2 346 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 TNFRSF12AQ9NP84 129 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 EXD2Q9NVH0 621 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 THUMPD1Q9NXG2 353 aaKnown RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.84□□□□□ -1.47
USP54-202ENST00000413442 BAIAP2L1Q9UHR4 511 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 EDARQ9UNE0 448 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 FAF1Q9UNN5 650 aaPredicted RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 WIF1Q9Y5W5 379 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 V9GYY5 206 aaPredicted RBP5.84□□□□□ -1.47
USP54-202ENST00000413442 FREM3P0C091 2139 aa5.84□□□□□ -1.47
USP54-202ENST00000413442 NBASA2RRP1 2371 aa5.84□□□□□ -1.48
USP54-202ENST00000413442 DNAJC13O75165 2243 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 A0A1W2PS29 197 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 C7orf72A4D263 438 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 FAM166BA8MTA8 275 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ALG1L2C9J202 215 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 NPIPA2E9PIF3 369 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 NPIPA3F8WFD2 350 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 DVL2O14641 736 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 TNFRSF21O75509 655 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 PDE9AO76083 593 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 G6PDP11413 515 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 CYP4B1P13584 511 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ATP6V1C1P21283 382 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 UQCRC2P22695 453 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 HTR1EP28566 365 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 CEACAM8P31997 349 aaPredicted RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 GABRA3P34903 492 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 OPRM1P35372 400 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 KIR3DL1P43629 444 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 MRPL19P49406 292 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 MAP2K6P52564 334 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 SUMO3P55854 103 aaPredicted RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 WDR4P57081 412 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 MAGOHP61326 146 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 POU6F2P78424 691 aaPredicted RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 DUSP2Q05923 314 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 BST1Q10588 318 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 DUSP8Q13202 625 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 GNA13Q14344 377 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 LTB4RQ15722 352 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 EMC4Q5J8M3 183 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 EXOSC6Q5RKV6 272 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 PDSS1Q5T2R2 415 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 C1orf185Q5T7R7 199 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 PRAMEF20Q5VT98 475 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 FNDC7Q5VTL7 733 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 GTF2IRD2BQ6EKJ0 949 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 MFSD12Q6NUT3 480 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 TMEM107Q6UX40 140 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ANGPTL8Q6UXH0 198 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ZCCHC23Q6ZST2 131 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 CHMP1BQ7LBR1 199 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ZNF551Q7Z340 670 aaPredicted RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 GTF2IRD2Q86UP8 949 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 CD163Q86VB7 1156 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 IFNEQ86WN2 208 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ULK2Q8IYT8 1036 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 AMER2Q8N7J2 671 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ZNF781Q8N8C0 355 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 WDSUB1Q8N9V3 476 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 TOR1AIP2Q8NFQ8 470 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 OR5M3Q8NGP4 307 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 CDC26Q8NHZ8 85 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 WNT2BQ93097 391 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 ZBTB8AQ96BR9 441 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 C14orf79Q96F83 325 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 MAELQ96JY0 434 aaKnown RBP5.83□□□□□ -1.48
USP54-202ENST00000413442 ATP6V1G3Q96LB4 118 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 C3orf30Q96M34 536 aa5.83□□□□□ -1.48
USP54-202ENST00000413442 JSRP1Q96MG2 331 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms