RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 PLEKHJ1Q9NW61 149 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 TAS2R3Q9NYW6 316 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 MYEF2Q9P2K5 600 aaKnown RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 MED16Q9Y2X0 877 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 RHBDD3Q9Y3P4 386 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 HMX3A6NHT5 357 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 ANHXE9PGG2 379 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 H7C2Y5 167 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 LRRTM2O43300 516 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 HTRA2O43464 458 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 AP1G1O43747 822 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 SLC19A2O60779 497 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 SEC14L2O76054 403 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 NDUFB2O95178 105 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 CAMLGP49069 296 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 PCBD1P61457 104 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 GLO1Q04760 184 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 OR7A5Q15622 319 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 FAM182AQ5T1J6 154 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 NDUFAF5Q5TEU4 345 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 LIPKQ5VXJ0 399 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 GSG1LQ6UXU4 331 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 LINC00696Q6ZRV3 163 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 ZNF551Q7Z340 670 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 MCATQ8IVS2 390 aaKnown RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 ZNF687Q8N1G0 1237 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 BEST3Q8N1M1 668 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 TMEM178AQ8NBL3 297 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 C2CD4AQ8NCU7 369 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 FAM83FQ8NEG4 500 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 OR51Q1Q8NH59 317 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 LMF1Q96S06 567 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 PBDC1Q9BVG4 233 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 MTG2Q9H4K7 406 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 HEBP1Q9NRV9 189 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 GNG12Q9UBI6 72 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 SLC7A7Q9UM01 511 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 RP2O75695 350 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 UBL4AP11441 157 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 CKMT1AP12532 417 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 HMGCLP35914 325 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 MC3RP41968 323 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 CCL11P51671 97 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 ACTBP60709 375 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 ACTG1P63261 375 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 KIR2DS3Q14952 304 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 ZNF678Q5SXM1 525 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 CDCA2Q69YH5 1023 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 ZNF704Q6ZNC4 412 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 BPHLQ86WA6 291 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 KLBQ86Z14 1044 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 PHC2Q8IXK0 858 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 TMEM151AQ8N4L1 468 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 CHST14Q8NCH0 376 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 OR51D1Q8NGF3 324 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 OR51L1Q8NGJ5 315 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 ARRDC3Q96B67 414 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 SAT2Q96F10 170 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 ADOQ96SZ5 270 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 FAM117AQ9C073 453 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 SLC7A8Q9UHI5 535 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 KLHL21Q9UJP4 597 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 CMAHPQ9Y471 501 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 TMEM184BQ9Y519 407 aaPredicted RBP6.82□□□□□ -1.32
UPF2-203ENST00000397053 OARD1Q9Y530 152 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 LRRC42Q9Y546 428 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 WIF1Q9Y5W5 379 aa6.82□□□□□ -1.32
UPF2-203ENST00000397053 IQGAP3Q86VI3 1631 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 A0A096LPI6 279 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 ANTXRLA6NF34 631 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 ZNF705EA8MWA4 302 aaPredicted RBP6.81□□□□□ -1.32
UPF2-203ENST00000397053 HSBP1L1C9JCN9 74 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 SSX4O60224 188 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 SLC34A2O95436 690 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 WDPCPO95876 746 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 AMY2AP04746 511 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 SERPINA7P05543 415 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 HTR2AP28223 471 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 PTGIRP43119 386 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 CSNK1EP49674 416 aaKnown RBP6.81□□□□□ -1.32
UPF2-203ENST00000397053 IDH3GP51553 393 aaPredicted RBP6.81□□□□□ -1.32
UPF2-203ENST00000397053 EEF1A2Q05639 463 aaKnown RBP6.81□□□□□ -1.32
UPF2-203ENST00000397053 MYBPHQ13203 477 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 MOGQ16653 247 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 MEP1AQ16819 746 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 ZFAND4Q86XD8 727 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 HS3ST5Q8IZT8 346 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 MMP21Q8N119 569 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 IMP4Q96G21 291 aaKnown RBP6.81□□□□□ -1.32
UPF2-203ENST00000397053 LIN37Q96GY3 246 aaPredicted RBP6.81□□□□□ -1.32
UPF2-203ENST00000397053 LRR1Q96L50 414 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 SERINC2Q96SA4 455 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 RDH14Q9HBH5 336 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 FBXO7Q9Y3I1 522 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 CLTCQ00610 1675 aaKnown RBP6.81□□□□□ -1.32
UPF2-203ENST00000397053 TRBV11-1A0A0K0K1C0 115 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 A0A0U1RQK1 487 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 DCDC2BA2VCK2 349 aa6.81□□□□□ -1.32
UPF2-203ENST00000397053 A8MXE2 369 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms