RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 Q6ZSR9 355 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 COMMD6Q7Z4G1 85 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 MDGA2Q7Z553 956 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 ZCCHC7Q8N3Z6 543 aaKnown RBP11.17□□□□□ -0.62
HLA-F-230ENST00000606273 C1orf52Q8N6N3 182 aaKnown RBP11.17□□□□□ -0.62
HLA-F-230ENST00000606273 ZNF781Q8N8C0 355 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 PLPP5Q8NEB5 264 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 C11orf24Q96F05 449 aaPredicted RBP11.17□□□□□ -0.62
HLA-F-230ENST00000606273 OR1F2PQ96R84 312 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 SECISBP2Q96T21 854 aaKnown RBP11.17□□□□□ -0.62
HLA-F-230ENST00000606273 PIP5K1AQ99755 562 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 NPLQ9BXD5 320 aaPredicted RBP11.17□□□□□ -0.62
HLA-F-230ENST00000606273 COPS7BQ9H9Q2 264 aaPredicted RBP11.17□□□□□ -0.62
HLA-F-230ENST00000606273 NECTIN3Q9NQS3 549 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 TEX10Q9NXF1 929 aaPredicted RBP11.17□□□□□ -0.62
HLA-F-230ENST00000606273 GIMAP2Q9UG22 337 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 TRAF6Q9Y4K3 522 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 ASB4Q9Y574 426 aa11.17□□□□□ -0.62
HLA-F-230ENST00000606273 IGKV3D-11A0A0A0MRZ8 115 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 A0A1W2PR48 441 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 CLCA1A8K7I4 914 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 HMGB1P1B2RPK0 211 aaPredicted RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 TMEM114B3SHH9 223 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 FAM47E-STBD1D6RA91 191 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 H3BQF6 201 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 SMPD2O60906 423 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 CRCPO75575 148 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 IFNA2P01563 188 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 HRGP04196 525 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 KLK1P06870 262 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 LINC00032P0C843 101 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 PPP2R1BP30154 601 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 SERPINB5P36952 375 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 GDNFP39905 211 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 SLC1A6P48664 564 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 ARFIP1P53367 373 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 PPIAP62937 165 aaKnown RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 BTKQ06187 659 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 TGM3Q08188 693 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 C10orf62Q5T681 223 aaPredicted RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 RIPPLY2Q5TAB7 128 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 NIPAL1Q6NVV3 410 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 YTHDF3Q7Z739 585 aaKnown RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 CLNKQ7Z7G1 428 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 NUDT13Q86X67 352 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 RELL2Q8NC24 303 aaPredicted RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 SRFBP1Q8NEF9 429 aaKnown RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 BHLHE22Q8NFJ8 381 aaPredicted RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 PPP1R14CQ8TAE6 165 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 LINC01560Q8TB33 94 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 UBE2FQ969M7 185 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 LRRC46Q96FV0 321 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 C3orf30Q96M34 536 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 ROGDIQ9GZN7 287 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 ZDHHC11Q9H8X9 412 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 CLK4Q9HAZ1 481 aaKnown RBP11.16□□□□□ -0.62
HLA-F-230ENST00000606273 NKIRAS1Q9NYS0 192 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 VPS29Q9UBQ0 182 aa11.16□□□□□ -0.62
HLA-F-230ENST00000606273 A0A088AWK7 358 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 A0A1B0GVC2 190 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 A0A1W2PS29 197 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 PINLYPA6NC86 204 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 GLOD5A6NK44 160 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 CLDN4O14493 209 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 PIP5K1BO14986 540 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 WDR1O75083 606 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 LDB3O75112 727 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 GOSR1O95249 250 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 HSPA4LO95757 839 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 AIFM1O95831 613 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 FAM58BPP0C7Q3 252 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 HSD3B1P14060 373 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 BMP7P18075 431 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 ZNF10P21506 573 aaPredicted RBP11.15□□□□□ -0.62
HLA-F-230ENST00000606273 CPN2P22792 545 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 HSD3B2P26439 372 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 ASCL1P50553 236 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 ID2Q02363 134 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 STX3Q13277 289 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 C1orf185Q5T7R7 199 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 THAP5Q7Z6K1 395 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 SCUBE1Q8IWY4 988 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 OR4N5Q8IXE1 308 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 GBP7Q8N8V2 638 aaPredicted RBP11.15□□□□□ -0.62
HLA-F-230ENST00000606273 TWIST2Q8WVJ9 160 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 PIGTQ969N2 578 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 ANKRD9Q96BM1 317 aaPredicted RBP11.15□□□□□ -0.62
HLA-F-230ENST00000606273 PTCHD1Q96NR3 888 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 EBPLQ9BY08 206 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 EML4Q9HC35 981 aaKnown RBP11.15□□□□□ -0.62
HLA-F-230ENST00000606273 LYRM4Q9HD34 91 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 DEPPQ9NTK1 212 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 PNPOQ9NVS9 261 aa11.15□□□□□ -0.62
HLA-F-230ENST00000606273 HSPB2A8KAH6 182 aa11.14□□□□□ -0.63
HLA-F-230ENST00000606273 PSMD12O00232 456 aaPredicted RBP11.14□□□□□ -0.63
HLA-F-230ENST00000606273 FGF17O60258 216 aa11.14□□□□□ -0.63
HLA-F-230ENST00000606273 SNNO75324 88 aaPredicted RBP11.14□□□□□ -0.63
HLA-F-230ENST00000606273 SKAP2O75563 359 aaPredicted RBP11.14□□□□□ -0.63
HLA-F-230ENST00000606273 IGHG3P01860 377 aa11.14□□□□□ -0.63
HLA-F-230ENST00000606273 NEFHP12036 1026 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms