RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PRR22Q8IZ63 422 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 TRIML2Q8N7C3 387 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 SLC16A11Q8NCK7 471 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 ST6GALNAC3Q8NDV1 305 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 OR4N2Q8NGD1 307 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 TSPEARQ8WU66 669 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 THOC1Q96FV9 657 aaKnown RBP13.29□□□□□ -0.28
DDX54-203ENST00000546869 CHMP6Q96FZ7 201 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 C16orf58Q96GQ5 468 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 RILPQ96NA2 401 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 ZNF385DQ9H6B1 395 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 RMND5AQ9H871 391 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 IL1RL2Q9HB29 575 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 SLC52A3Q9NQ40 469 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 FAF1Q9UNN5 650 aaPredicted RBP13.29□□□□□ -0.28
DDX54-203ENST00000546869 DUXAA6NLW8 204 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 UGT2B11O75310 529 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 TRIM3O75382 744 aaPredicted RBP13.28□□□□□ -0.28
DDX54-203ENST00000546869 GLSO94925 669 aaPredicted RBP13.28□□□□□ -0.28
DDX54-203ENST00000546869 CBX6O95503 412 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 ACP2P11117 423 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 TRPC1P48995 793 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 TDGF1P3P51864 188 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
DDX54-203ENST00000546869 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDX54-203ENST00000546869 SAXO2Q658L1 398 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 ANKRD46Q86W74 232 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 ATCAYQ86WG3 371 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 SIAH3Q8IW03 269 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 OR9I1Q8NGQ6 314 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 GPR151Q8TDV0 419 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 SLC9A6Q92581 669 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 NEURL3Q96EH8 262 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 TMEM41AQ96HV5 264 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 PANX1Q96RD7 426 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 ADOQ96SZ5 270 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 TMEM120AQ9BXJ8 343 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 EQTNQ9NQ60 294 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 FAM53CQ9NYF3 392 aa13.28□□□□□ -0.28
DDX54-203ENST00000546869 CCDC154A6NI56 674 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 J3QKU1 62 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 ASNA1O43681 348 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 CPSF4O95639 269 aaKnown RBP13.27□□□□□ -0.29
DDX54-203ENST00000546869 GUSBP08236 651 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 ZNF24P17028 368 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 NCF2P19878 526 aaPredicted RBP13.27□□□□□ -0.29
DDX54-203ENST00000546869 IL12BP29460 328 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 KCNK10P57789 538 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 GPR85P60893 370 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 TP53BP2Q13625 1128 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 LASP1Q14847 261 aaKnown RBP13.27□□□□□ -0.29
DDX54-203ENST00000546869 DUSP5Q16690 384 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 RNFT1Q5M7Z0 435 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 SZRD1Q7Z422 152 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 OR5M3Q8NGP4 307 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 ADAMTS15Q8TE58 950 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 ITCHQ96J02 903 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 NODALQ96S42 347 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 G6PC3Q9BUM1 346 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 BTBD2Q9BX70 525 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 TTTY12Q9BZ98 90 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 ZFP64Q9NPA5 681 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 QPCTLQ9NXS2 382 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 VPS4AQ9UN37 437 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 ABCG2Q9UNQ0 655 aa13.27□□□□□ -0.29
DDX54-203ENST00000546869 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.27□□□□□ -0.29
DDX54-203ENST00000546869 RNF103-CHMP3A0A140T963 221 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 GXYLT2A0PJZ3 443 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 PINLYPA6NC86 204 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 C9JVG2 144 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 ACOT7O00154 380 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 RFXANKO14593 260 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 FADS1O60427 444 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 ICOSLGO75144 302 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 KCNK2O95069 426 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 AGR2O95994 175 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 AK1P00568 194 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 NGFRP08138 427 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 CYP4B1P13584 511 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 MATN1P21941 496 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 MST1P26927 711 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 PTPN6P29350 595 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 ADSLP30566 484 aaPredicted RBP13.26□□□□□ -0.29
DDX54-203ENST00000546869 PTGDSP41222 190 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 DNASE1L1P49184 302 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 KCNJ2P63252 427 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 POU6F2P78424 691 aaPredicted RBP13.26□□□□□ -0.29
DDX54-203ENST00000546869 PMP22Q01453 160 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 IGFBP7Q16270 282 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 PRAMEF20Q5VT98 475 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 WDR53Q7Z5U6 358 aaPredicted RBP13.26□□□□□ -0.29
DDX54-203ENST00000546869 SLC22A16Q86VW1 577 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 CHDHQ8NE62 594 aaPredicted RBP13.26□□□□□ -0.29
DDX54-203ENST00000546869 OR5AK3PQ8NH89 298 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 PIK3R3Q92569 461 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 GTF2H4Q92759 462 aa13.26□□□□□ -0.29
DDX54-203ENST00000546869 VPS33AQ96AX1 596 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms