RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 DOLKQ9UPQ8 538 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 LIPT1Q9Y234 373 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 WDR45Q9Y484 360 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 PCDH15Q96QU1 1955 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 CHST10O43529 356 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 CYP7B1O75881 506 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 OXSR1O95747 527 aaPredicted RBP14.07□□□□□ -0.16
GPC3-202ENST00000394299 CD36P16671 472 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 CD27P26842 260 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 TGFBR2P37173 567 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 RFX3P48380 749 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 ST13P50502 369 aaKnown RBP14.07□□□□□ -0.16
GPC3-202ENST00000394299 GFERP55789 205 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 HPCAP84074 193 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 RPL6Q02878 288 aaKnown RBP14.07□□□□□ -0.16
GPC3-202ENST00000394299 MGAT2Q10469 447 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 PUS10Q3MIT2 529 aaKnown RBP14.07□□□□□ -0.16
GPC3-202ENST00000394299 ACSM5Q6NUN0 579 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 TCEANCQ8N8B7 351 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 ARHGDIGQ99819 225 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 PLA2G12AQ9BZM1 189 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 DSN1Q9H410 356 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 UCKL1Q9NWZ5 548 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 CNIH4Q9P003 139 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 KCNE5Q9UJ90 142 aa14.07□□□□□ -0.16
GPC3-202ENST00000394299 C19orf53Q9UNZ5 99 aaPredicted RBP14.07□□□□□ -0.16
GPC3-202ENST00000394299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 GXYLT2A0PJZ3 443 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 HRKO00198 91 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 PEX12O00623 359 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 PRG2P13727 222 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 CSNK1EP49674 416 aaKnown RBP14.06□□□□□ -0.16
GPC3-202ENST00000394299 CSNK2BP67870 215 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 PRICKLE4Q2TBC4 344 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 ENTPD8Q5MY95 495 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 PTCRAQ6ISU1 281 aaPredicted RBP14.06□□□□□ -0.16
GPC3-202ENST00000394299 KIF18BQ86Y91 864 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 ARHGEF39Q8N4T4 335 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 ZNF655Q8N720 491 aaPredicted RBP14.06□□□□□ -0.16
GPC3-202ENST00000394299 MYDGFQ969H8 173 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 MAT2BQ9NZL9 334 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 SLC13A4Q9UKG4 626 aa14.06□□□□□ -0.16
GPC3-202ENST00000394299 DUXAA6NLW8 204 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 TGFBR3LH3BV60 316 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 STK25O00506 426 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 GABARAPO95166 117 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 GKN3PP0CG01 181 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 MYF5P13349 255 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 SMIM11AP58511 58 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 RELAQ04206 551 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 DCTN2Q13561 401 aaKnown RBP14.05□□□□□ -0.16
GPC3-202ENST00000394299 SOWAHCQ53LP3 525 aaPredicted RBP14.05□□□□□ -0.16
GPC3-202ENST00000394299 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.05□□□□□ -0.16
GPC3-202ENST00000394299 ZNF836Q6ZNA1 936 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 ZAR1Q86SH2 424 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 P2RY8Q86VZ1 359 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 SIX5Q8N196 739 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 PEX11GQ96HA9 241 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 HSPA12BQ96MM6 686 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 OR5M11Q96RB7 305 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 PTGFRNQ9P2B2 879 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 ZNF443Q9Y2A4 671 aaPredicted RBP14.05□□□□□ -0.16
GPC3-202ENST00000394299 SPAG17Q6Q759 2223 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.05□□□□□ -0.16
GPC3-202ENST00000394299 ATP1B1P05026 303 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 CCNYL3P0C7X3 344 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 NME1P15531 152 aaKnown RBP14.05□□□□□ -0.16
GPC3-202ENST00000394299 GRK5P34947 590 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 MAGEA8P43361 318 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 BMXP51813 675 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 DUSP8Q13202 625 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 GINS1Q14691 196 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 ARHGAP11BQ3KRB8 267 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 UBE2UQ5VVX9 321 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 SLX4IPQ5VYV7 408 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 Q7L0L9 218 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 GPR151Q8TDV0 419 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 DIO2Q92813 273 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 RNF31Q96EP0 1072 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 TGM7Q96PF1 710 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 SLC38A3Q99624 504 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 MCHR1Q99705 422 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 MTHFD2LQ9H903 347 aaPredicted RBP14.05□□□□□ -0.16
GPC3-202ENST00000394299 ANKHQ9HCJ1 492 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 FBXL21Q9UKT6 434 aa14.05□□□□□ -0.16
GPC3-202ENST00000394299 FOXS1O43638 330 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 TLX2O43763 284 aaPredicted RBP14.04□□□□□ -0.16
GPC3-202ENST00000394299 PRKYO43930 277 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 HSMCR30P0CW71 290 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 ADORA3P0DMS8 318 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 BCKDHBP21953 392 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 RGS8P57771 180 aaPredicted RBP14.04□□□□□ -0.16
GPC3-202ENST00000394299 BTG2P78543 158 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 ELOCQ15369 112 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 TIGD6Q17RP2 521 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 LRIT3Q3SXY7 679 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 PRAMEF8Q5VWM4 474 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 PRAMEF7Q5VXH5 474 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 C1orf94Q6P1W5 598 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 SAMD14Q8IZD0 417 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms