RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 A0A1B0GTL3 188 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 A0A1W2PNV4 684 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 C2orf72A6NCS6 295 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 LINC01387J3KSC0 135 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 TSPAN2O60636 221 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 SMPD2O60906 423 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 REM1O75628 298 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 OTCP00480 354 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 CT45A8P0DMV1 189 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 CT45A9P0DMV2 189 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 PEPDP12955 493 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 CNTFP26441 200 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 MAGEA12P43365 314 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 PNLIPRP2P54317 469 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 EEFSECP57772 596 aaKnown RBP12.67□□□□□ -0.38
VMP1-209ENST00000588915 MRPS22P82650 360 aaKnown RBP12.67□□□□□ -0.38
VMP1-209ENST00000588915 TSNAXIP1Q2TAA8 658 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 CT45A2Q5DJT8 189 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 PLD6Q8N2A8 252 aaKnown RBP12.67□□□□□ -0.38
VMP1-209ENST00000588915 OR4F6Q8NGB9 312 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 RDH11Q8TC12 318 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 SELENOMQ8WWX9 145 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 TMBIM1Q969X1 311 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 KLHL29Q96CT2 875 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 STARD4Q96DR4 205 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 COX4I2Q96KJ9 171 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 BDH2Q9BUT1 245 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 C1QTNF3Q9BXJ4 246 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 SHCBP1LQ9BZQ2 653 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 VPS11Q9H270 941 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 ELOVL5Q9NYP7 299 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 SNX6Q9UNH7 406 aa12.67□□□□□ -0.38
VMP1-209ENST00000588915 ZIC3O60481 467 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 TGM6O95932 706 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 PDYNP01213 254 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 HSD3B1P14060 373 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 CRYGSP22914 178 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 HSD3B2P26439 372 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 DPP4P27487 766 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 KRT20P35900 424 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 CD79BP40259 229 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 STARP49675 285 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 DSCR4P56555 118 aaPredicted RBP12.66□□□□□ -0.38
VMP1-209ENST00000588915 OCRLQ01968 901 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 ACKR1Q16570 336 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 ZNF628Q5EBL2 1059 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 Q5PR19 223 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
VMP1-209ENST00000588915 TAOK1Q7L7X3 1001 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 CHMP1BQ7LBR1 199 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 P4HA3Q7Z4N8 544 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 GCNT2Q8N0V5 402 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 SIMC1Q8NDZ2 872 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 MRRFQ96E11 262 aaKnown RBP12.66□□□□□ -0.38
VMP1-209ENST00000588915 CNRIP1Q96F85 164 aaPredicted RBP12.66□□□□□ -0.38
VMP1-209ENST00000588915 WFIKKN1Q96NZ8 548 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 FUT8Q9BYC5 575 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 ACSS3Q9H6R3 686 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 EHD3Q9NZN3 535 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 VPS29Q9UBQ0 182 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 MCM8Q9UJA3 840 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 UTS2RQ9UKP6 389 aa12.66□□□□□ -0.38
VMP1-209ENST00000588915 DEFB108AA8MXU0 73 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 LY6G6DO95868 133 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 RPS17P08708 135 aaKnown RBP12.65□□□□□ -0.38
VMP1-209ENST00000588915 PCSK2P16519 638 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 GRK2P25098 689 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 GAS1P54826 345 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 DUSP2Q05923 314 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 C2orf54Q08AI8 447 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 TRADDQ15628 312 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 UAP1Q16222 522 aaPredicted RBP12.65□□□□□ -0.38
VMP1-209ENST00000588915 SGO1Q5FBB7 561 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 C20orf204Q6ZNR8 217 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 RELL1Q8IUW5 271 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 CCDC116Q8IYX3 515 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
VMP1-209ENST00000588915 NUDT8Q8WV74 236 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 PGM2Q96G03 612 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 VSTM2LQ96N03 204 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 NSUN5Q96P11 429 aaKnown RBP12.65□□□□□ -0.38
VMP1-209ENST00000588915 ADOQ96SZ5 270 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 MRPL57Q9BQC6 102 aaKnown RBP12.65□□□□□ -0.38
VMP1-209ENST00000588915 SLC39A3Q9BRY0 314 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 STMN4Q9H169 189 aaPredicted RBP12.65□□□□□ -0.38
VMP1-209ENST00000588915 GRPEL1Q9HAV7 217 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 XPR1Q9UBH6 696 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 TRPS1Q9UHF7 1281 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 DKKL1Q9UK85 242 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 FBXL2Q9UKC9 423 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 NFU1Q9UMS0 254 aa12.65□□□□□ -0.38
VMP1-209ENST00000588915 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
VMP1-209ENST00000588915 SLC22A20A6NK97 555 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 EMC8O43402 210 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 PLOD3O60568 738 aa12.64□□□□□ -0.39
VMP1-209ENST00000588915 TNFRSF21O75509 655 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms