RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 RTL3Q8N8U3 475 aaKnown RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 ZNF540Q8NDQ6 660 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 OR13J1Q8NGT2 312 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 VANGL1Q8TAA9 524 aaPredicted RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 PTPMT1Q8WUK0 201 aaPredicted RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 PHLDA1Q8WV24 401 aaPredicted RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 LPGAT1Q92604 370 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 TRIM44Q96DX7 344 aaPredicted RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 C10orf90Q96M02 699 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 KRT23Q9C075 422 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 POLR3FQ9H1D9 316 aaPredicted RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 MMP27Q9H306 513 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 ECT2Q9H8V3 914 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 CHST11Q9NPF2 352 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 ANO10Q9NW15 660 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 CHCHD3Q9NX63 227 aaKnown RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 ACTR3BQ9P1U1 418 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 CRNNQ9UBG3 495 aaPredicted RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 PRO0461Q9UI25 63 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 PLAGL1Q9UM63 463 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 DDX19BQ9UMR2 479 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 RRP15Q9Y3B9 282 aaKnown RBP2.22□□□□□ -2.05
VAPA-208ENST00000584796 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.22□□□□□ -2.05
VAPA-208ENST00000584796 AP1M2Q9Y6Q5 423 aa2.22□□□□□ -2.05
VAPA-208ENST00000584796 ZGRF1Q86YA3 2104 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 SMIM28A0A1B0GU29 152 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 A0A1B0GUA9 196 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 A0A1W2PR80 420 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ESYT2A0FGR8 921 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 OOEPA6NGQ2 149 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 COL6A5A8TX70 2615 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 PHOX2AO14813 284 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 BCAS2O75934 225 aaPredicted RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 ERLIN2O94905 339 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 SLCO2B1O94956 709 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 TRUB2O95900 331 aaKnown RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 HPRP00739 348 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 HEXBP07686 556 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 HLA-EP13747 358 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 MMP9P14780 707 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 PDGFRAP16234 1089 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 PRLRP16471 622 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 PIK3R1P27986 724 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 HSPA4P34932 840 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ARL2P36404 184 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 PEX19P40855 299 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 PRPHP41219 470 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 UQCRFS1P47985 274 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 CSNK1EP49674 416 aaKnown RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 ACADVLP49748 655 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ATXN3P54252 364 aaPredicted RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 SNU13P55769 128 aaKnown RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 ASIC1P78348 528 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 HMGN5P82970 282 aaKnown RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 GFPT1Q06210 699 aaPredicted RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 KLHL30Q0D2K2 578 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 MTF1Q14872 753 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 KARSQ15046 597 aaKnown RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 TGIF1Q15583 401 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 DLG2Q15700 870 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 SNAPC1Q16533 368 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ANKDD1AQ495B1 522 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 CBWD6Q4V339 395 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 SLC39A12Q504Y0 691 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 HSP90AA5PQ58FG0 334 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 SLC25A53Q5H9E4 307 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 CBWD3Q5JTY5 395 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ETFRF1Q6IPR1 90 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 CENPPQ6IPU0 288 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 NOTUMQ6P988 496 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 MOXD1Q6UVY6 613 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ALKAL1Q6UXT8 129 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 PPP1R21Q6ZMI0 780 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 GBP6Q6ZN66 633 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 SPATA21Q7Z572 469 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ADCK1Q86TW2 530 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 MFN1Q8IWA4 741 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 KLHL7Q8IXQ5 586 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 TBC1D21Q8IYX1 336 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 CMTM8Q8IZV2 173 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 AQP11Q8NBQ7 271 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 NUP37Q8NFH4 326 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 FBXO30Q8TB52 745 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 MAPK15Q8TD08 544 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 GATAD1Q8WUU5 269 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 TEKT4Q8WW24 435 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 HTR3CQ8WXA8 447 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 ZNF606Q8WXB4 792 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 IRGQQ8WZA9 623 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 MED8Q96G25 268 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 MSANTD3Q96H12 275 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 RBM18Q96H35 190 aaKnown RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 ZNF486Q96H40 463 aaPredicted RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 SLC45A3Q96JT2 553 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 CEP170P1Q96L14 293 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 LINC00615Q96LM1 132 aaPredicted RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 RMDN2Q96LZ7 410 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 CEP295NLQ96MC4 621 aa2.21□□□□□ -2.06
VAPA-208ENST00000584796 C1orf147Q96MC9 270 aaPredicted RBP2.21□□□□□ -2.06
VAPA-208ENST00000584796 AGAP4Q96P64 663 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms