RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 KCNJ2P63252 427 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CDSNQ15517 529 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF628Q5EBL2 1059 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EMC4Q5J8M3 183 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 XKRXQ6PP77 449 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PAOXQ6QHF9 649 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 IKBIPQ70UQ0 350 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PRR22Q8IZ63 422 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 OR52R1Q8NGF1 315 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF675Q8TD23 568 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PHF10Q8WUB8 498 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 VKORC1Q9BQB6 163 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MYNNQ9NPC7 610 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TCF7L2Q9NQB0 619 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EHD3Q9NZN3 535 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CFL2Q9Y281 166 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 HCFC1P51610 2035 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 A0A0G2JND7 137 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LRRC3CA6NJW4 275 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CAPN14A8MX76 684 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 RFPL3SP0C7P2 107 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TACR1P25103 407 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ABCD3P28288 659 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GRNP28799 593 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EMDP50402 254 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NRG3P56975 720 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C2orf80Q0P641 193 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NNATQ16517 81 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PRSS53Q2L4Q9 553 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 BICRALQ6AI39 1079 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TRILQ7L0X0 811 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SPATA19Q7Z5L4 167 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FAM9CQ8IZT9 166 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LIX1Q8N485 282 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 OR9A2Q8NGT5 310 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DIO2Q92813 273 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TSSK3Q96PN8 268 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 OR52B2Q96RD2 323 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NSRP1Q9H0G5 558 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF703Q9H7S9 590 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ANKRA2Q9H9E1 313 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZFP64Q9NPA5 681 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SLC35C2Q9NQQ7 365 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ASIC5Q9NY37 505 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 KLF2Q9Y5W3 355 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PCNX3Q9H6A9 2034 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 A0A1B0GVC2 190 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ANKRD33BA6NCL7 494 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TP53I11O14683 189 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DDCP20711 480 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 AGAP20933 346 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TMED10P49755 219 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SMSP52788 366 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 LSM12Q3MHD2 195 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 FAM71E1Q6IPT2 247 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SAMD14Q8IZD0 417 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 RFWD2Q8NHY2 731 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SPPL2AQ8TCT8 520 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 STON2Q8WXE9 905 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 KAT2AQ92830 837 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 EBF4Q9BQW3 602 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DOHHQ9BU89 302 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CCDC28BQ9BUN5 200 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MIEF1Q9NQG6 463 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 BOKQ9UMX3 212 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 EXO1Q9UQ84 846 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ENTPD4Q9Y227 616 aa16.39■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GMNCA6NCL1 334 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NPIPA2E9PIF3 369 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NPIPA3F8WFD2 350 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TRIM3O75382 744 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 G6PDP11413 515 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SEC24CP53992 1094 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DIO3P55073 304 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PTGR1Q14914 329 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SLC10A1Q14973 349 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TBCELQ5QJ74 424 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SP5Q6BEB4 398 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DESI1Q6ICB0 168 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MARVELD2Q8N4S9 558 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CLHC1Q8NHS4 586 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 HSPBAP1Q96EW2 488 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 LCORQ96JN0 433 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 EGLN2Q96KS0 407 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 RILPQ96NA2 401 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SECISBP2Q96T21 854 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TP63Q9H3D4 680 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GIMAP4Q9NUV9 329 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PRODH2Q9UF12 536 aa16.38■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ABCA12Q86UK0 2595 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 OR14I1A6ND48 311 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 UBDO15205 165 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SUSD5O60279 629 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NME6O75414 186 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ABCB1P08183 1280 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ENDOUP21128 410 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GXYLT1Q4G148 440 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 FNDC7Q5VTL7 733 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CGB2Q6NT52 195 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms