RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 IFNA7P01567 189 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 MPC1LP0DKB6 136 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 OCLNQ16625 522 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 CDKL4Q5MAI5 379 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 MORN1Q5T089 497 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SYT9Q86SS6 491 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 BBS10Q8TAM1 723 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SCRN2Q96FV2 425 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SLC38A2Q96QD8 506 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 ZNF607Q96SK3 696 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 CACNG6Q9BXT2 260 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 POLDIP3Q9BY77 421 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 MTG2Q9H4K7 406 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 ZFP64Q9NPA5 681 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 EQTNQ9NQ60 294 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SLC13A4Q9UKG4 626 aa13.84□□□□□ -0.19
COL6A2-201ENST00000300527 ELF5Q9UKW6 265 aaPredicted RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 SF3B6Q9Y3B4 125 aaKnown RBP13.84□□□□□ -0.19
COL6A2-201ENST00000300527 FAM170BA6NMN3 283 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 ACP2P11117 423 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 VIPR1P32241 457 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TMEM201Q5SNT2 666 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 PLEKHS1Q5SXH7 462 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 GARNL3Q5VVW2 1013 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 SFRP4Q6FHJ7 346 aaPredicted RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TMEM220Q6QAJ8 160 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 SLCO4C1Q6ZQN7 724 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 CFAP77Q6ZQR2 320 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 CMTM8Q8IZV2 173 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 FAM26EQ8N5C1 309 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 OR6T1Q8NGN1 323 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 SMG9Q9H0W8 520 aaKnown RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 DPAGT1Q9H3H5 408 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 RANBP3Q9H6Z4 567 aaPredicted RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 DMRT3Q9NQL9 472 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 OR6C2Q9NZP2 312 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 PLXNA4Q9HCM2 1894 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 A0A0C4DFX4 3053 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 PRODHO43272 600 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 URODP06132 367 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 FAM157BP0CG42 384 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 GNSP15586 552 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 UQCRC2P22695 453 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 GPR4P46093 362 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TAS2R41P59536 307 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 SNRPD1P62314 119 aaKnown RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TPBGQ13641 420 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 C3orf38Q5JPI3 329 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 SLC27A4Q6P1M0 643 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TMEM91Q6ZNR0 172 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 FAM92BQ6ZTR7 304 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 HSD11B1LQ7Z5J1 315 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TOMM5Q8N4H5 51 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF366Q8N895 744 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF480Q8WV37 535 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 F2RL3Q96RI0 385 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TREX2Q9BQ50 279 aaPredicted RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 ISG20L2Q9H9L3 353 aaKnown RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 BRF2Q9HAW0 419 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TDP1Q9NUW8 608 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 ZSCAN32Q9NX65 697 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 GATBO75879 557 aaKnown RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TFPIP10646 304 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 SP140Q13342 867 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 TRAPPC5Q8IUR0 188 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 UXS1Q8NBZ7 420 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 DDX31Q9H8H2 851 aaKnown RBP13.83□□□□□ -0.2
COL6A2-201ENST00000300527 MED20Q9H944 212 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 HCN3Q9P1Z3 774 aa13.83□□□□□ -0.2
COL6A2-201ENST00000300527 A8MVJ9 347 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 ERAL1O75616 437 aaKnown RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 RGS11O94810 467 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 MRPL3P09001 348 aaKnown RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 IRS1P35568 1242 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 MAP2K6P52564 334 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 TSPAN5P62079 268 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 ADCK2Q7Z695 626 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 KLHL36Q8N4N3 616 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 METTL17Q9H7H0 456 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 TESQ9UGI8 421 aaKnown RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 CHURC1-FNTBB4DL54 471 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 M0R233 179 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 LGALS8O00214 317 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 SOCS6O14544 535 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 MPC2O95563 127 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 SRPRAP08240 638 aaKnown RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 HSF2Q03933 536 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 LGALSLQ3ZCW2 172 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 ARSKQ6UWY0 536 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 PRSS45Q7RTY3 260 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 LRRTM4Q86VH4 590 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 TOR1AIP2Q8NFQ8 470 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 GCDHQ92947 438 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 ECHDC3Q96DC8 303 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 ZC3HAV1LQ96H79 300 aaKnown RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF354BQ96LW1 612 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 COQ10AQ96MF6 247 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 TRAF4Q9BUZ4 470 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-201ENST00000300527 KLF16Q9BXK1 252 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms