RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 DUSP8Q13202 625 aa26.79■■□□□ 1.88
BRF1-213ENST00000548421 SSPNQ14714 243 aa26.79■■□□□ 1.88
BRF1-213ENST00000548421 TNFAIP8L2Q6P589 184 aaPredicted RBP26.79■■□□□ 1.88
BRF1-213ENST00000548421 PAPD4Q6PIY7 484 aaKnown RBP26.79■■□□□ 1.88
BRF1-213ENST00000548421 FAM156AQ8NDB6 213 aa26.79■■□□□ 1.88
BRF1-213ENST00000548421 OR2T12Q8NG77 320 aa26.79■■□□□ 1.88
BRF1-213ENST00000548421 C16orf58Q96GQ5 468 aa26.79■■□□□ 1.88
BRF1-213ENST00000548421 WDR77Q9BQA1 342 aaPredicted RBP26.79■■□□□ 1.88
BRF1-213ENST00000548421 OR10A5Q9H207 317 aa26.79■■□□□ 1.88
BRF1-213ENST00000548421 GMPR2Q9P2T1 348 aaKnown RBP26.79■■□□□ 1.88
BRF1-213ENST00000548421 HS3ST3B1Q9Y662 390 aa26.79■■□□□ 1.88
BRF1-213ENST00000548421 IGKV3-11P04433 115 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 TCN1P20061 433 aaPredicted RBP26.78■■□□□ 1.88
BRF1-213ENST00000548421 EEF1A2Q05639 463 aaKnown RBP26.78■■□□□ 1.88
BRF1-213ENST00000548421 ZCCHC12Q6PEW1 402 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 NET1Q7Z628 596 aaPredicted RBP26.78■■□□□ 1.88
BRF1-213ENST00000548421 HORMAD2Q8N7B1 307 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 ZNF615Q8N8J6 731 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 ZNF721Q8TF20 911 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 CCDC124Q96CT7 223 aaKnown RBP26.78■■□□□ 1.88
BRF1-213ENST00000548421 REXO5Q96IC2 774 aaKnown RBP26.78■■□□□ 1.88
BRF1-213ENST00000548421 OR51I1Q9H343 314 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 COPS7AQ9UBW8 275 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 SLC7A8Q9UHI5 535 aa26.78■■□□□ 1.88
BRF1-213ENST00000548421 TNFRSF21O75509 655 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 SORBS2O94875 1100 aaKnown RBP26.77■■□□□ 1.88
BRF1-213ENST00000548421 CLPSP04118 112 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 BMP2P12643 396 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 EMDP50402 254 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 DSTNP60981 165 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 OR1N1Q8NGS0 311 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 JADE3Q92613 823 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 KIAA1143Q96AT1 154 aaPredicted RBP26.77■■□□□ 1.88
BRF1-213ENST00000548421 NACC2Q96BF6 587 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 YIPF4Q9BSR8 244 aa26.77■■□□□ 1.88
BRF1-213ENST00000548421 SUCOQ9UBS9 1254 aaKnown RBP26.77■■□□□ 1.88
BRF1-213ENST00000548421 HEMK1Q9Y5R4 338 aaPredicted RBP26.77■■□□□ 1.88
BRF1-213ENST00000548421 SPINK2P20155 84 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 SLC37A1P57057 533 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 ZNF155Q12901 538 aaPredicted RBP26.76■■□□□ 1.87
BRF1-213ENST00000548421 TBC1D25Q3MII6 688 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 GCNT6Q5T4J0 391 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 CDC73Q6P1J9 531 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 RNF111Q6ZNA4 994 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 LGI4Q8N135 537 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 ZNF321PQ8N8H1 164 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 CDRT4Q8N9R6 151 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 B3GNT7Q8NFL0 401 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 TNIP2Q8NFZ5 429 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 OR5D16Q8NGK9 328 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 ZNF700Q9H0M5 742 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 GPN2Q9H9Y4 310 aaPredicted RBP26.76■■□□□ 1.87
BRF1-213ENST00000548421 THUMPD1Q9NXG2 353 aaKnown RBP26.76■■□□□ 1.87
BRF1-213ENST00000548421 PRODH2Q9UF12 536 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 PPIEQ9UNP9 301 aaKnown RBP26.76■■□□□ 1.87
BRF1-213ENST00000548421 USP22Q9UPT9 525 aa26.76■■□□□ 1.87
BRF1-213ENST00000548421 A0A1W2PQ72 361 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 HMGN4O00479 90 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 ASNA1O43681 348 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 NME6O75414 186 aaPredicted RBP26.75■■□□□ 1.87
BRF1-213ENST00000548421 SEC24DO94855 1032 aaPredicted RBP26.75■■□□□ 1.87
BRF1-213ENST00000548421 NUDT7P0C024 238 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 HTR1EP28566 365 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 OTX2P32243 289 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 MSX2P35548 267 aaPredicted RBP26.75■■□□□ 1.87
BRF1-213ENST00000548421 ID4P47928 161 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 MAN2A2P49641 1150 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 BNIP2Q12982 314 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 PCOLCEQ15113 449 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 TGIF1Q15583 401 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 ADRM1Q16186 407 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 ERICH5Q6P6B1 374 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 NFAM1Q8NET5 270 aaPredicted RBP26.75■■□□□ 1.87
BRF1-213ENST00000548421 C16orf52Q8NHV5 167 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 FBXO30Q8TB52 745 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 OR7D2Q96RA2 312 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 FOLH1BQ9HBA9 442 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 CFL2Q9Y281 166 aa26.75■■□□□ 1.87
BRF1-213ENST00000548421 IGHV1-45A0A0A0MS14 117 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 ELOVL7A1L3X0 281 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 DUXAA6NLW8 204 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 SOCS6O14544 535 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 OR12D1P0DN82 309 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 GPR143P51810 404 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 EXOSC6Q5RKV6 272 aaKnown RBP26.74■■□□□ 1.87
BRF1-213ENST00000548421 KIRREL2Q6UWL6 708 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 PPP1R32Q7Z5V6 425 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 PTOV1Q86YD1 416 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 ZZZ3Q8IYH5 903 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 ADAMTS15Q8TE58 950 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 SLC9A6Q92581 669 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 NCLNQ969V3 563 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 ASB9Q96DX5 294 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 NUDT9Q9BW91 350 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 TMEM38AQ9H6F2 299 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 MRPS18BQ9Y676 258 aaKnown RBP26.74■■□□□ 1.87
BRF1-213ENST00000548421 AKAP13Q12802 2813 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 CIB2O75838 187 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 COX6A1P12074 109 aa26.74■■□□□ 1.87
BRF1-213ENST00000548421 TRIM25Q14258 630 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms