RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 C9orf40Q8IXQ3 194 aa22.52■■□□□ 1.19
HMGA2-208ENST00000537429 KIF2BQ8N4N8 673 aa22.52■■□□□ 1.19
HMGA2-208ENST00000537429 TMEM102Q8N9M5 508 aaPredicted RBP22.52■■□□□ 1.19
HMGA2-208ENST00000537429 SLC39A3Q9BRY0 314 aa22.52■■□□□ 1.19
HMGA2-208ENST00000537429 PRODH2Q9UF12 536 aa22.52■■□□□ 1.19
HMGA2-208ENST00000537429 CFL2Q9Y281 166 aa22.52■■□□□ 1.19
HMGA2-208ENST00000537429 HEMK1Q9Y5R4 338 aaPredicted RBP22.52■■□□□ 1.19
HMGA2-208ENST00000537429 CLIC1O00299 241 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 EBAG9O00559 213 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 UCNP55089 124 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 BNIP1Q12981 228 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 CAPRIN1Q14444 709 aaKnown RBP22.51■■□□□ 1.19
HMGA2-208ENST00000537429 MYBPC3Q14896 1274 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 C8orf82Q6P1X6 216 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-208ENST00000537429 HSDL2Q6YN16 418 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 OR8K3Q8NH51 312 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 CPNE5Q9HCH3 593 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 ATP13A2Q9NQ11 1180 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-208ENST00000537429 DTX4Q9Y2E6 619 aa22.51■■□□□ 1.19
HMGA2-208ENST00000537429 TRBV11-1A0A0K0K1C0 115 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 ARGFXA6NJG6 315 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 PRKNO60260 465 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-208ENST00000537429 UNC5CO95185 931 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 KRT75O95678 551 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 SERPINA7P05543 415 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 TMPRSS3P57727 454 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 RNF4P78317 190 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 VAC14Q08AM6 782 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 LASP1Q14847 261 aaKnown RBP22.5■■□□□ 1.19
HMGA2-208ENST00000537429 EBPQ15125 230 aaKnown RBP22.5■■□□□ 1.19
HMGA2-208ENST00000537429 DEFB109BQ30KR1 87 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 MFSD12Q6NUT3 480 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 ZCCHC12Q6PEW1 402 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 KDF1Q8NAX2 398 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-208ENST00000537429 FBXO27Q8NI29 283 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 HOXB13Q92826 284 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-208ENST00000537429 VSTM2LQ96N03 204 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 GPATCH1Q9BRR8 931 aaKnown RBP22.5■■□□□ 1.19
HMGA2-208ENST00000537429 FOLH1BQ9HBA9 442 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 EQTNQ9NQ60 294 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 LOC400499M0QZD8 3231 aa22.5■■□□□ 1.19
HMGA2-208ENST00000537429 KRT16P08779 473 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 MAP3K8P41279 467 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 MVDP53602 400 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 RRADP55042 308 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 AIMP2Q13155 320 aaKnown RBP22.49■■□□□ 1.19
HMGA2-208ENST00000537429 NANOGP8Q6NSW7 305 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 SLC29A4Q7RTT9 530 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 KBTBD2Q8IY47 623 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 CLEC1AQ8NC01 280 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 C16orf58Q96GQ5 468 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 HOPXQ9BPY8 73 aaPredicted RBP22.49■■□□□ 1.19
HMGA2-208ENST00000537429 CPPED1Q9BRF8 314 aaPredicted RBP22.49■■□□□ 1.19
HMGA2-208ENST00000537429 IKZF5Q9H5V7 419 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 NANOGQ9H9S0 305 aa22.49■■□□□ 1.19
HMGA2-208ENST00000537429 B2RBV5 119 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 K7ENP7 123 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 ZFAND5O76080 213 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 ITGAMP11215 1152 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 PPIBP23284 216 aaKnown RBP22.48■■□□□ 1.19
HMGA2-208ENST00000537429 PRIM2P49643 509 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 AP2B1P63010 937 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 EXOSC6Q5RKV6 272 aaKnown RBP22.48■■□□□ 1.19
HMGA2-208ENST00000537429 INO80CQ6PI98 192 aaPredicted RBP22.48■■□□□ 1.19
HMGA2-208ENST00000537429 GPR155Q7Z3F1 870 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 CDRT4Q8N9R6 151 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 NUBPLQ8TB37 319 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 PNPT1Q8TCS8 783 aaKnown RBP22.48■■□□□ 1.19
HMGA2-208ENST00000537429 MIPOL1Q8TD10 442 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 ADIPOR1Q96A54 375 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 SLC35G5Q96KT7 338 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 ACTRT3Q9BYD9 372 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 WWTR1Q9GZV5 400 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 SERHL2Q9H4I8 314 aa22.48■■□□□ 1.19
HMGA2-208ENST00000537429 C2orf92A0A1B0GVN3 265 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 TMEM200CA6NKL6 621 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 MATN1P21941 496 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 SLC6A2P23975 617 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 PSG6Q00889 435 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 CDC73Q6P1J9 531 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 ANGPTL8Q6UXH0 198 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 RNF130Q86XS8 419 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 OR8J3Q8NGG0 315 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 OR52N2Q8NGI0 321 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 YIPF4Q9BSR8 244 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 LMF2Q9BU23 707 aaKnown RBP22.47■■□□□ 1.19
HMGA2-208ENST00000537429 ITPAQ9BY32 194 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 DEFB126Q9BYW3 111 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 TRIM8Q9BZR9 551 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 ING2Q9H160 280 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 FAF1Q9UNN5 650 aaPredicted RBP22.47■■□□□ 1.19
HMGA2-208ENST00000537429 EVPLLA8MZ36 301 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 GPX2P18283 190 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 CPOXP36551 454 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 MAN2A2P49641 1150 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 CASP9P55211 416 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 SOX8P57073 446 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 MTPNP58546 118 aa22.47■■□□□ 1.19
HMGA2-208ENST00000537429 RPS26P62854 115 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms