RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 C9orf40Q8IXQ3 194 aa22.52■■□□□ 1.19
HMGA2-207ENST00000537275 KIF2BQ8N4N8 673 aa22.52■■□□□ 1.19
HMGA2-207ENST00000537275 TMEM102Q8N9M5 508 aaPredicted RBP22.52■■□□□ 1.19
HMGA2-207ENST00000537275 SLC39A3Q9BRY0 314 aa22.52■■□□□ 1.19
HMGA2-207ENST00000537275 PRODH2Q9UF12 536 aa22.52■■□□□ 1.19
HMGA2-207ENST00000537275 CFL2Q9Y281 166 aa22.52■■□□□ 1.19
HMGA2-207ENST00000537275 HEMK1Q9Y5R4 338 aaPredicted RBP22.52■■□□□ 1.19
HMGA2-207ENST00000537275 CLIC1O00299 241 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 EBAG9O00559 213 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 UCNP55089 124 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 BNIP1Q12981 228 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 CAPRIN1Q14444 709 aaKnown RBP22.51■■□□□ 1.19
HMGA2-207ENST00000537275 MYBPC3Q14896 1274 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 C8orf82Q6P1X6 216 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-207ENST00000537275 HSDL2Q6YN16 418 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 OR8K3Q8NH51 312 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 CPNE5Q9HCH3 593 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 ATP13A2Q9NQ11 1180 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-207ENST00000537275 DTX4Q9Y2E6 619 aa22.51■■□□□ 1.19
HMGA2-207ENST00000537275 TRBV11-1A0A0K0K1C0 115 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 ARGFXA6NJG6 315 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 PRKNO60260 465 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-207ENST00000537275 UNC5CO95185 931 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 KRT75O95678 551 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 SERPINA7P05543 415 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 TMPRSS3P57727 454 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 RNF4P78317 190 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 VAC14Q08AM6 782 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 LASP1Q14847 261 aaKnown RBP22.5■■□□□ 1.19
HMGA2-207ENST00000537275 EBPQ15125 230 aaKnown RBP22.5■■□□□ 1.19
HMGA2-207ENST00000537275 DEFB109BQ30KR1 87 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 MFSD12Q6NUT3 480 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 ZCCHC12Q6PEW1 402 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 KDF1Q8NAX2 398 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-207ENST00000537275 FBXO27Q8NI29 283 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 HOXB13Q92826 284 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-207ENST00000537275 VSTM2LQ96N03 204 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 GPATCH1Q9BRR8 931 aaKnown RBP22.5■■□□□ 1.19
HMGA2-207ENST00000537275 FOLH1BQ9HBA9 442 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 EQTNQ9NQ60 294 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 LOC400499M0QZD8 3231 aa22.5■■□□□ 1.19
HMGA2-207ENST00000537275 KRT16P08779 473 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 MAP3K8P41279 467 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 MVDP53602 400 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 RRADP55042 308 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 AIMP2Q13155 320 aaKnown RBP22.49■■□□□ 1.19
HMGA2-207ENST00000537275 NANOGP8Q6NSW7 305 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 SLC29A4Q7RTT9 530 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 KBTBD2Q8IY47 623 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 CLEC1AQ8NC01 280 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 C16orf58Q96GQ5 468 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 HOPXQ9BPY8 73 aaPredicted RBP22.49■■□□□ 1.19
HMGA2-207ENST00000537275 CPPED1Q9BRF8 314 aaPredicted RBP22.49■■□□□ 1.19
HMGA2-207ENST00000537275 IKZF5Q9H5V7 419 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 NANOGQ9H9S0 305 aa22.49■■□□□ 1.19
HMGA2-207ENST00000537275 B2RBV5 119 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 K7ENP7 123 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 ZFAND5O76080 213 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 ITGAMP11215 1152 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 PPIBP23284 216 aaKnown RBP22.48■■□□□ 1.19
HMGA2-207ENST00000537275 PRIM2P49643 509 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 AP2B1P63010 937 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 EXOSC6Q5RKV6 272 aaKnown RBP22.48■■□□□ 1.19
HMGA2-207ENST00000537275 INO80CQ6PI98 192 aaPredicted RBP22.48■■□□□ 1.19
HMGA2-207ENST00000537275 GPR155Q7Z3F1 870 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 CDRT4Q8N9R6 151 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 NUBPLQ8TB37 319 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 PNPT1Q8TCS8 783 aaKnown RBP22.48■■□□□ 1.19
HMGA2-207ENST00000537275 MIPOL1Q8TD10 442 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 ADIPOR1Q96A54 375 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 SLC35G5Q96KT7 338 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 ACTRT3Q9BYD9 372 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 WWTR1Q9GZV5 400 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 SERHL2Q9H4I8 314 aa22.48■■□□□ 1.19
HMGA2-207ENST00000537275 C2orf92A0A1B0GVN3 265 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 TMEM200CA6NKL6 621 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 MATN1P21941 496 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 SLC6A2P23975 617 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 PSG6Q00889 435 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 CDC73Q6P1J9 531 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 ANGPTL8Q6UXH0 198 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 RNF130Q86XS8 419 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 OR8J3Q8NGG0 315 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 OR52N2Q8NGI0 321 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 YIPF4Q9BSR8 244 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 LMF2Q9BU23 707 aaKnown RBP22.47■■□□□ 1.19
HMGA2-207ENST00000537275 ITPAQ9BY32 194 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 DEFB126Q9BYW3 111 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 TRIM8Q9BZR9 551 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 ING2Q9H160 280 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 FAF1Q9UNN5 650 aaPredicted RBP22.47■■□□□ 1.19
HMGA2-207ENST00000537275 EVPLLA8MZ36 301 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 GPX2P18283 190 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 CPOXP36551 454 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 MAN2A2P49641 1150 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 CASP9P55211 416 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 SOX8P57073 446 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 MTPNP58546 118 aa22.47■■□□□ 1.19
HMGA2-207ENST00000537275 RPS26P62854 115 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms