RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 C8orf82Q6P1X6 216 aaPredicted RBP16.32■□□□□ 0.2
CHMP3-207ENST00000485465 ZCCHC12Q6PEW1 402 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 HSDL2Q6YN16 418 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 CCDC81Q6ZN84 652 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 RINLQ6ZS11 566 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 PROSER1Q86XN7 944 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 C9orf40Q8IXQ3 194 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 OR8K3Q8NH51 312 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 PNPT1Q8TCS8 783 aaKnown RBP16.32■□□□□ 0.2
CHMP3-207ENST00000485465 ZCCHC14Q8WYQ9 949 aaKnown RBP16.32■□□□□ 0.2
CHMP3-207ENST00000485465 C16orf58Q96GQ5 468 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 SLC35G5Q96KT7 338 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 GPATCH1Q9BRR8 931 aaKnown RBP16.32■□□□□ 0.2
CHMP3-207ENST00000485465 NANOGQ9H9S0 305 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 FOLH1BQ9HBA9 442 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 EQTNQ9NQ60 294 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 POLHQ9Y253 713 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 CEP295Q9C0D2 2601 aa16.32■□□□□ 0.2
CHMP3-207ENST00000485465 TMEM8BA6NDV4 472 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 EVPLLA8MZ36 301 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 ATP5HO75947 161 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 ZFAND5O76080 213 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 SERPINA7P05543 415 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 MATN1P21941 496 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 PRIM2P49643 509 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 RNF4P78317 190 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 SLC25A3Q00325 362 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 ZNF155Q12901 538 aaPredicted RBP16.31■□□□□ 0.2
CHMP3-207ENST00000485465 LASP1Q14847 261 aaKnown RBP16.31■□□□□ 0.2
CHMP3-207ENST00000485465 MYBPC3Q14896 1274 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 EBPQ15125 230 aaKnown RBP16.31■□□□□ 0.2
CHMP3-207ENST00000485465 ANGPTL8Q6UXH0 198 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 CCDC121Q6ZUS5 278 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 SLC29A4Q7RTT9 530 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 RNF130Q86XS8 419 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 KBTBD2Q8IY47 623 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 TMEM102Q8N9M5 508 aaPredicted RBP16.31■□□□□ 0.2
CHMP3-207ENST00000485465 CDRT4Q8N9R6 151 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 RBM15BQ8NDT2 890 aaKnown RBP16.31■□□□□ 0.2
CHMP3-207ENST00000485465 OR8J3Q8NGG0 315 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 OR52N2Q8NGI0 321 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 VSTM2LQ96N03 204 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 SH3GL1Q99961 368 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 YIPF4Q9BSR8 244 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 ACTRT3Q9BYD9 372 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 TRIM8Q9BZR9 551 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 IKZF5Q9H5V7 419 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 ATP13A2Q9NQ11 1180 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 NDE1Q9NXR1 346 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 FAF1Q9UNN5 650 aaPredicted RBP16.31■□□□□ 0.2
CHMP3-207ENST00000485465 DTX4Q9Y2E6 619 aa16.31■□□□□ 0.2
CHMP3-207ENST00000485465 ASPMQ8IZT6 3477 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 ARGFXA6NJG6 315 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 PRKNO60260 465 aaPredicted RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 ITGAMP11215 1152 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 SLC6A2P23975 617 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 CPOXP36551 454 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 MVDP53602 400 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 RRADP55042 308 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 CASP9P55211 416 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 MTPNP58546 118 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 PSME3P61289 254 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 RPS26P62854 115 aaKnown RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 AP2B1P63010 937 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 AIMP2Q13155 320 aaKnown RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 SELPLGQ14242 412 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 COX20Q5RI15 118 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 EXOSC6Q5RKV6 272 aaKnown RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 CDC73Q6P1J9 531 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 C16orf89Q6UX73 402 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 WDR53Q7Z5U6 358 aaPredicted RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 CLEC1AQ8NC01 280 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 OR5L2Q8NGL0 311 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 MIPOL1Q8TD10 442 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 HOXB13Q92826 284 aaPredicted RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 ADIPOR1Q96A54 375 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 LMF2Q9BU23 707 aaKnown RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 THUMPD3Q9BV44 507 aaKnown RBP16.3■□□□□ 0.2
CHMP3-207ENST00000485465 ITPAQ9BY32 194 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 DEFB126Q9BYW3 111 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 WWTR1Q9GZV5 400 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 SERHL2Q9H4I8 314 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 CORO2BQ9UQ03 480 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 NCOR2Q9Y618 2525 aa16.3■□□□□ 0.2
CHMP3-207ENST00000485465 A0A087WV48 116 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 C15orf38-AP3S2A0A0A6YYH1 394 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 C2orf92A0A1B0GVN3 265 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 TTC36A6NLP5 189 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 HNRNPCL1O60812 293 aaKnown RBP16.29■□□□□ 0.2
CHMP3-207ENST00000485465 ACP2P11117 423 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 GPX2P18283 190 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 ITPKBP27987 946 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 MAP3K8P41279 467 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 MAGEA8P43361 318 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 PPICP45877 212 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 MAN2A2P49641 1150 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 DCAF7P61962 342 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms