RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CPSF7Q8N684 471 aaKnown RBP9.3□□□□□ -0.92
TMEM248-202ENST00000413593 ZNF781Q8N8C0 355 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 ZFP62Q8NB50 900 aaPredicted RBP9.3□□□□□ -0.92
TMEM248-202ENST00000413593 GOLM1Q8NBJ4 401 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 POGLUT1Q8NBL1 392 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 C17orf47Q8NEP4 570 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 PRR7Q8TB68 274 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 ERP27Q96DN0 273 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 SPACA9Q96E40 222 aaPredicted RBP9.3□□□□□ -0.92
TMEM248-202ENST00000413593 ZNF764Q96H86 408 aaPredicted RBP9.3□□□□□ -0.92
TMEM248-202ENST00000413593 PPP3R2Q96LZ3 170 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 TSSK3Q96PN8 268 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 BBS4Q96RK4 519 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 PAIP2Q9BPZ3 127 aaKnown RBP9.3□□□□□ -0.92
TMEM248-202ENST00000413593 BCAP29Q9UHQ4 241 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 HAO1Q9UJM8 370 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 CFL2Q9Y281 166 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.3□□□□□ -0.92
TMEM248-202ENST00000413593 RAP2CQ9Y3L5 183 aa9.3□□□□□ -0.92
TMEM248-202ENST00000413593 USP9XQ93008 2570 aaPredicted RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 A0A0G2JMM0 328 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 A0A1W2PPB8 328 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 A0A1W2PRS3 328 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 KIR3DP1A8MWS1 328 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 NPIPA5E9PKD4 350 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 G3V3Y1 287 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 PLOD3O60568 738 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 TBX19O60806 448 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 UNC5CO95185 931 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 JUNP05412 331 aaKnown RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 CCL3P10147 92 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 BCKDHAP12694 445 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 H2AFXP16104 143 aaPredicted RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 MAPK1P28482 360 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 NTSP30990 170 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 MPIP34949 423 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 RFC3P40938 356 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 SLC1A6P48664 564 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 EMDP50402 254 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 RPL14P50914 215 aaKnown RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 NCBP2P52298 156 aaKnown RBP eCLIP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 KCNK10P57789 538 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 BST1Q10588 318 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 STX3Q13277 289 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 PDE7AQ13946 482 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 UBAP2LQ14157 1087 aaKnown RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 ATP6AP1LQ52LC2 224 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 C6orf136Q5SQH8 315 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 FHL5Q5TD97 284 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 AGBL2Q5U5Z8 902 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 GFRALQ6UXV0 394 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 TMEM64Q6YI46 380 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 DND1Q8IYX4 353 aaKnown RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 OR7G2Q8NG99 324 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 OR52R1Q8NGF1 315 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 CLHC1Q8NHS4 586 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 MGARPQ8TDB4 240 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 PAQR8Q8TEZ7 354 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 KAT2AQ92830 837 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 GFM2Q969S9 779 aaKnown RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 ARL8AQ96BM9 186 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 GPR137Q96N19 417 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 ITPAQ9BY32 194 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 NXF5Q9H1B4 397 aaKnown RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 TSPAN10Q9H1Z9 355 aaPredicted RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 ANKRA2Q9H9E1 313 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 SH2D2AQ9NP31 389 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 SACM1LQ9NTJ5 587 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 ARGLU1Q9NWB6 273 aaPredicted RBP9.29□□□□□ -0.92
TMEM248-202ENST00000413593 NKIRAS1Q9NYS0 192 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 SEC14L3Q9UDX4 400 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 PRODH2Q9UF12 536 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 BAIAP2L1Q9UHR4 511 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 NPIPA1Q9UND3 350 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 OSGIN2Q9Y236 505 aa9.29□□□□□ -0.92
TMEM248-202ENST00000413593 POLEQ07864 2286 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 PINLYPA6NC86 204 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 PDPK1O15530 556 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 AKAP10O43572 662 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 SEMA7AO75326 666 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 BCAS2O75934 225 aaPredicted RBP9.28□□□□□ -0.92
TMEM248-202ENST00000413593 SLITRK5O94991 958 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 AGFG2O95081 481 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 LRATO95237 230 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 P04436 131 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 CNR1P21554 472 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 ASMTP46597 345 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 NRG3P56975 720 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 RPS6KA2Q15349 733 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 PDCD2Q16342 344 aaPredicted RBP9.28□□□□□ -0.92
TMEM248-202ENST00000413593 NNATQ16517 81 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 NTRK2Q16620 822 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 KRTCAP3Q53RY4 240 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 ZNF385BQ569K4 471 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 ANKRD26P1Q6NSI1 321 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 FAM47EQ6ZV65 393 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 KIRREL3Q8IZU9 778 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 FNDC5Q8NAU1 212 aa9.28□□□□□ -0.92
TMEM248-202ENST00000413593 FAM13CQ8NE31 585 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms