RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ANXA11P50995 505 aaKnown RBP28.5■■■□□ 2.15
CCM2-219ENST00000544363 SESN3P58005 492 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 CDK6Q00534 326 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 LASP1Q14847 261 aaKnown RBP28.5■■■□□ 2.15
CCM2-219ENST00000544363 CCDC157Q569K6 752 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 FHL5Q5TD97 284 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 FAM111BQ6SJ93 734 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 ZC3H7AQ8IWR0 971 aaKnown RBP28.5■■■□□ 2.15
CCM2-219ENST00000544363 SLC38A9Q8NBW4 561 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 NFKBIDQ8NI38 313 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 A4GALTQ9NPC4 353 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 MAT2BQ9NZL9 334 aa28.5■■■□□ 2.15
CCM2-219ENST00000544363 COL27A1Q8IZC6 1860 aaPredicted RBP28.5■■■□□ 2.15
CCM2-219ENST00000544363 GIMAP1-GIMAP5A0A087WTJ2 511 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 OR2W5A6NFC9 320 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 PLOD3O60568 738 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 SERPINA1P01009 418 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 MAOAP21397 527 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 MGAT2Q10469 447 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 BIKQ13323 160 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 TRMT12Q53H54 448 aaKnown RBP28.49■■■□□ 2.15
CCM2-219ENST00000544363 PACS2Q86VP3 889 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 SLC30A8Q8IWU4 369 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 EID3Q8N140 333 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 PQLC1Q8N2U9 271 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 RAB8BQ92930 207 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 POP5Q969H6 163 aaKnown RBP28.49■■■□□ 2.15
CCM2-219ENST00000544363 CLIP3Q96DZ5 547 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 GIMAP5Q96F15 307 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 RBM18Q96H35 190 aaKnown RBP28.49■■■□□ 2.15
CCM2-219ENST00000544363 MKKSQ9NPJ1 570 aaPredicted RBP28.49■■■□□ 2.15
CCM2-219ENST00000544363 C19orf53Q9UNZ5 99 aaPredicted RBP28.49■■■□□ 2.15
CCM2-219ENST00000544363 OTOGLQ3ZCN5 2332 aa28.49■■■□□ 2.15
CCM2-219ENST00000544363 SEC16AO15027 2179 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 POLR1CO15160 346 aaPredicted RBP28.48■■■□□ 2.15
CCM2-219ENST00000544363 TXNL4AP83876 142 aaKnown RBP28.48■■■□□ 2.15
CCM2-219ENST00000544363 MC2RQ01718 297 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 LRRC23Q53EV4 343 aaPredicted RBP28.48■■■□□ 2.15
CCM2-219ENST00000544363 TBCELQ5QJ74 424 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 FBXO30Q8TB52 745 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 CTHRC1Q96CG8 243 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 MS4A4EQ96PG1 132 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 C6orf203Q9P0P8 240 aaPredicted RBP28.48■■■□□ 2.15
CCM2-219ENST00000544363 V9GYQ6 96 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 WDR87Q6ZQQ6 2873 aa28.48■■■□□ 2.15
CCM2-219ENST00000544363 GDF9O60383 454 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 OR12D1P0DN82 309 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 SERTAD2Q14140 314 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 INTS11Q5TA45 600 aaKnown RBP28.47■■■□□ 2.15
CCM2-219ENST00000544363 PAPD5Q8NDF8 572 aaKnown RBP28.47■■■□□ 2.15
CCM2-219ENST00000544363 OR5D16Q8NGK9 328 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 RNF31Q96EP0 1072 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 C16orf58Q96GQ5 468 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 DGAT2Q96PD7 388 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 CTRCQ99895 268 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 YIPF4Q9BSR8 244 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 UGT2B28Q9BY64 529 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 NECTIN3Q9NQS3 549 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 FBXO8Q9NRD0 319 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 SPEGQ15772 3267 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 FOXD2O60548 495 aaPredicted RBP28.47■■■□□ 2.15
CCM2-219ENST00000544363 TFPTP0C1Z6 253 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 CT62P0C5K7 136 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 CCL4P13236 92 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 STT3AP46977 705 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 MAP4K2Q12851 820 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 LARP7Q4G0J3 582 aaKnown RBP eCLIP28.47■■■□□ 2.15
CCM2-219ENST00000544363 ENPP6Q6UWR7 440 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 DGAT2L6Q6ZPD8 337 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 QSOX2Q6ZRP7 698 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 COX15Q7KZN9 410 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 FAM110BQ8TC76 370 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 DOK4Q8TEW6 326 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 PTCHD1Q96NR3 888 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 SEPHS2Q99611 448 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 ACTRT3Q9BYD9 372 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 CXorf21Q9HAI6 301 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 EQTNQ9NQ60 294 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 SLC22A11Q9NSA0 550 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 AKAP7Q9P0M2 348 aaPredicted RBP28.47■■■□□ 2.15
CCM2-219ENST00000544363 ANGPT4Q9Y264 503 aa28.47■■■□□ 2.15
CCM2-219ENST00000544363 GCM2O75603 506 aaPredicted RBP28.46■■■□□ 2.15
CCM2-219ENST00000544363 MAPK10P53779 464 aa28.46■■■□□ 2.15
CCM2-219ENST00000544363 INSM1Q01101 510 aaPredicted RBP28.46■■■□□ 2.15
CCM2-219ENST00000544363 MYBPC3Q14896 1274 aa28.46■■■□□ 2.15
CCM2-219ENST00000544363 VWA2Q5GFL6 755 aa28.46■■■□□ 2.15
CCM2-219ENST00000544363 CCDC80Q76M96 950 aa28.46■■■□□ 2.15
CCM2-219ENST00000544363 PIP4P1Q86T03 277 aa28.46■■■□□ 2.15
CCM2-219ENST00000544363 SLC38A5Q8WUX1 472 aa28.46■■■□□ 2.15
CCM2-219ENST00000544363 XAGE5Q8WWM1 108 aa28.46■■■□□ 2.15
CCM2-219ENST00000544363 PELOQ9BRX2 385 aaKnown RBP28.46■■■□□ 2.15
CCM2-219ENST00000544363 SAMD4AQ9UPU9 718 aaKnown RBP28.46■■■□□ 2.15
CCM2-219ENST00000544363 FER1L5A0AVI2 2057 aa28.45■■■□□ 2.15
CCM2-219ENST00000544363 PRKD3O94806 890 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 GCKP35557 465 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 PTDSS1P48651 473 aaKnown RBP28.45■■■□□ 2.14
CCM2-219ENST00000544363 MAN2A2P49641 1150 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 NKAIN1Q4KMZ8 207 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 FAM98BQ52LJ0 330 aaKnown RBP28.45■■■□□ 2.14
CCM2-219ENST00000544363 REEP3Q6NUK4 255 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms