RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TRIML2Q8N7C3 387 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 MORN4Q8NDC4 146 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 B3GNT7Q8NFL0 401 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 OR11G2Q8NGC1 345 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 OR4A15Q8NGL6 344 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 SUN3Q8TAQ9 357 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 MOAP1Q96BY2 351 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 VMP1Q96GC9 406 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 FBXL20Q96IG2 436 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 CNPPD1Q9BV87 410 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 MYLK2Q9H1R3 596 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 CXorf21Q9HAI6 301 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 SLAMF7Q9NQ25 335 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 MAT2BQ9NZL9 334 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 BTNL2Q9UIR0 455 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 LEF1Q9UJU2 399 aaPredicted RBP10.28□□□□□ -0.76
CHD4-202ENST00000430771 FBXL4Q9UKA2 621 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 MAN2B2Q9Y2E5 1009 aa10.28□□□□□ -0.76
CHD4-202ENST00000430771 APC2O95996 2303 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 A0A087WV48 116 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 A0A087WV62 115 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 IGHV3-20A0A0C4DH32 117 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 MYOCOSA0A1B0GUC4 107 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PRSS51A0A1B0GVH4 220 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 A0A1W2PP18 115 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 WASHC1A8K0Z3 465 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PRAMEF2O60811 474 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 ABCB1P08183 1280 aaPredicted RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 SNRPB2P08579 225 aaKnown RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 ICAM2P13598 275 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 CAPN3P20807 821 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PRDX6P30041 224 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 MC3RP41968 323 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 ZFP36L2P47974 494 aaKnown RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 DGKQP52824 942 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 WNT3P56703 355 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 SLC26A5P58743 744 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PRR5P85299 388 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 DUSP2Q05923 314 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 LTB4RQ15722 352 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 MAPKAPK3Q16644 382 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PRSS53Q2L4Q9 553 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PRICKLE4Q2TBC4 344 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 BTBD16Q32M84 506 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 ZNF750Q32MQ0 723 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 SPDYE7PQ495Y7 208 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 COQ5Q5HYK3 327 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 C6orf10Q5SRN2 563 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 IRAK1BP1Q5VVH5 260 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 FAM91A1Q658Y4 838 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PLAG1Q6DJT9 500 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 BHLHB9Q6PI77 547 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 TMEM107Q6UX40 140 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 TMEM64Q6YI46 380 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 SZRD1Q7Z422 152 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 ANKRD46Q86W74 232 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 FUNDC1Q8IVP5 155 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 TMEM102Q8N9M5 508 aaPredicted RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 KDF1Q8NAX2 398 aaPredicted RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 CLEC1AQ8NC01 280 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 OR7G1Q8NGA0 311 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 SLC2A12Q8TD20 617 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 SFXN5Q8TD22 340 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PPWD1Q96BP3 646 aaKnown RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 ITCHQ96J02 903 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 CCDC115Q96NT0 180 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PANX1Q96RD7 426 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 WDR77Q9BQA1 342 aaPredicted RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 CCDC106Q9BWC9 280 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 OR8D2Q9GZM6 311 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 DDX18Q9NVP1 670 aaKnown RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 TAS2R9Q9NYW1 312 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 ARMCX1Q9P291 453 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PTGFRNQ9P2B2 879 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 VPS4AQ9UN37 437 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 PPIEQ9UNP9 301 aaKnown RBP10.27□□□□□ -0.77
CHD4-202ENST00000430771 ERVK-19Q9WJR5 959 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 CFL2Q9Y281 166 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 NDUFAF1Q9Y375 327 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 ACACAQ13085 2346 aa10.27□□□□□ -0.77
CHD4-202ENST00000430771 OR6C76A6NM76 312 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 PLOD2O00469 737 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 RFXANKO14593 260 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 NKX2-8O15522 239 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 PLOD3O60568 738 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 ANP32DO95626 131 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 CPSF4O95639 269 aaKnown RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 WT1P19544 449 aaPredicted RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 EFNA1P20827 205 aaPredicted RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 CDK9P50750 372 aaKnown RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 CLCN2P51788 898 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 MRPS35P82673 323 aaKnown RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 CBX1P83916 185 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 FUT7Q11130 342 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 MAP4K2Q12851 820 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 CYLC2Q14093 348 aaPredicted RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 ZNF267Q14586 743 aaPredicted RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 MMEL1Q495T6 779 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 VPS26BQ4G0F5 336 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms