RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 PLA2G4AP47712 749 aa12.81□□□□□ -0.36
KNL1-209ENST00000532347 HIRAP54198 1017 aaPredicted RBP12.81□□□□□ -0.36
KNL1-209ENST00000532347 NAA30Q147X3 362 aaPredicted RBP12.81□□□□□ -0.36
KNL1-209ENST00000532347 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
KNL1-209ENST00000532347 CUX1P39880 1505 aa12.8□□□□□ -0.36
KNL1-209ENST00000532347 PHKA2P46019 1235 aa12.8□□□□□ -0.36
KNL1-209ENST00000532347 GZF1Q9H116 711 aaPredicted RBP12.8□□□□□ -0.36
KNL1-209ENST00000532347 DNMT3LQ9UJW3 386 aa12.8□□□□□ -0.36
KNL1-209ENST00000532347 RHOQP17081 205 aa12.79□□□□□ -0.36
KNL1-209ENST00000532347 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
KNL1-209ENST00000532347 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
KNL1-209ENST00000532347 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
KNL1-209ENST00000532347 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
KNL1-209ENST00000532347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.78□□□□□ -0.36
KNL1-209ENST00000532347 ABL1P00519 1130 aa12.77□□□□□ -0.37
KNL1-209ENST00000532347 TXLNAP40222 546 aa12.77□□□□□ -0.37
KNL1-209ENST00000532347 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
KNL1-209ENST00000532347 NGLY1Q96IV0 654 aa12.77□□□□□ -0.37
KNL1-209ENST00000532347 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
KNL1-209ENST00000532347 Q6ZNB5 142 aa12.76□□□□□ -0.37
KNL1-209ENST00000532347 ALDH16A1Q8IZ83 802 aa12.76□□□□□ -0.37
KNL1-209ENST00000532347 AIDAQ96BJ3 306 aa12.76□□□□□ -0.37
KNL1-209ENST00000532347 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
KNL1-209ENST00000532347 MAN1A2O60476 641 aa12.75□□□□□ -0.37
KNL1-209ENST00000532347 ZNF211Q13398 564 aaPredicted RBP12.75□□□□□ -0.37
KNL1-209ENST00000532347 C16orf46Q6P387 395 aa12.75□□□□□ -0.37
KNL1-209ENST00000532347 PHACTR1Q9C0D0 580 aa12.75□□□□□ -0.37
KNL1-209ENST00000532347 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
KNL1-209ENST00000532347 DNMT3AQ9Y6K1 912 aaPredicted RBP12.75□□□□□ -0.37
KNL1-209ENST00000532347 NUP160Q12769 1436 aa12.74□□□□□ -0.37
KNL1-209ENST00000532347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.74□□□□□ -0.372e-6■□□□□ 10.7
KNL1-209ENST00000532347 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
KNL1-209ENST00000532347 COX20Q5RI15 118 aa12.74□□□□□ -0.37
KNL1-209ENST00000532347 TIMMDC1Q9NPL8 285 aa12.74□□□□□ -0.37
KNL1-209ENST00000532347 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
KNL1-209ENST00000532347 EGFL7Q9UHF1 273 aa12.74□□□□□ -0.37
KNL1-209ENST00000532347 GRIN2AQ12879 1464 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 SOWAHDA6NJG2 315 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 SOBPA7XYQ1 873 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 LCE2BO14633 110 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 MTMR3Q13615 1198 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 MYO19Q96H55 970 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 ZDHHC3Q9NYG2 299 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
KNL1-209ENST00000532347 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
KNL1-209ENST00000532347 HELQQ8TDG4 1101 aa12.72□□□□□ -0.37
KNL1-209ENST00000532347 SENP2Q9HC62 589 aa12.72□□□□□ -0.37
KNL1-209ENST00000532347 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
KNL1-209ENST00000532347 RTN1Q16799 776 aa12.71□□□□□ -0.37
KNL1-209ENST00000532347 GMPR2Q9P2T1 348 aaKnown RBP12.71□□□□□ -0.37
KNL1-209ENST00000532347 A0A1B0GTH6 734 aa12.7□□□□□ -0.38
KNL1-209ENST00000532347 ICMTO60725 284 aa12.7□□□□□ -0.38
KNL1-209ENST00000532347 ATP4AP20648 1035 aa12.7□□□□□ -0.38
KNL1-209ENST00000532347 SND1Q7KZF4 910 aaKnown RBP eCLIP12.7□□□□□ -0.38
KNL1-209ENST00000532347 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
KNL1-209ENST00000532347 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
KNL1-209ENST00000532347 H3BRB1 525 aa12.69□□□□□ -0.38
KNL1-209ENST00000532347 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
KNL1-209ENST00000532347 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
KNL1-209ENST00000532347 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
KNL1-209ENST00000532347 TUT1Q9H6E5 874 aaKnown RBP12.69□□□□□ -0.38
KNL1-209ENST00000532347 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.38
KNL1-209ENST00000532347 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
KNL1-209ENST00000532347 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
KNL1-209ENST00000532347 TNFRSF10BO14763 440 aa12.68□□□□□ -0.38
KNL1-209ENST00000532347 MSX1P28360 303 aa12.68□□□□□ -0.38
KNL1-209ENST00000532347 SF3B2Q13435 895 aaKnown RBP12.68□□□□□ -0.38
KNL1-209ENST00000532347 DYRK1BQ9Y463 629 aa12.68□□□□□ -0.38
KNL1-209ENST00000532347 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
KNL1-209ENST00000532347 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
KNL1-209ENST00000532347 DGKZQ13574 1117 aa12.67□□□□□ -0.38
KNL1-209ENST00000532347 GLYCTKQ8IVS8 523 aa12.67□□□□□ -0.38
KNL1-209ENST00000532347 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
KNL1-209ENST00000532347 KLK14Q9P0G3 267 aa12.67□□□□□ -0.38
KNL1-209ENST00000532347 CEP170Q5SW79 1584 aa12.67□□□□□ -0.38
KNL1-209ENST00000532347 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
KNL1-209ENST00000532347 STIM2Q9P246 746 aa12.66□□□□□ -0.38
KNL1-209ENST00000532347 SNRPBP14678 240 aaKnown RBP12.65□□□□□ -0.38
KNL1-209ENST00000532347 PTSQ03393 145 aa12.65□□□□□ -0.38
KNL1-209ENST00000532347 C11orf91Q3C1V1 193 aa12.65□□□□□ -0.38
KNL1-209ENST00000532347 TMCO4Q5TGY1 634 aa12.65□□□□□ -0.38
KNL1-209ENST00000532347 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
KNL1-209ENST00000532347 GPAMQ9HCL2 828 aa12.65□□□□□ -0.38
KNL1-209ENST00000532347 ECM1Q16610 540 aa12.64□□□□□ -0.39
KNL1-209ENST00000532347 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
KNL1-209ENST00000532347 F11P03951 625 aa12.63□□□□□ -0.39
KNL1-209ENST00000532347 NPR3P17342 541 aa12.63□□□□□ -0.39
KNL1-209ENST00000532347 MPSTP25325 297 aa12.63□□□□□ -0.39
KNL1-209ENST00000532347 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
KNL1-209ENST00000532347 FAM26DQ5JW98 314 aa12.63□□□□□ -0.39
KNL1-209ENST00000532347 ZIC5Q96T25 663 aa12.63□□□□□ -0.39
KNL1-209ENST00000532347 GAS2L1Q99501 681 aaPredicted RBP12.63□□□□□ -0.39
KNL1-209ENST00000532347 GPC6Q9Y625 555 aaPredicted RBP12.63□□□□□ -0.39
KNL1-209ENST00000532347 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
KNL1-209ENST00000532347 FAM13AO94988 1023 aa12.62□□□□□ -0.39
KNL1-209ENST00000532347 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
KNL1-209ENST00000532347 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
KNL1-209ENST00000532347 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
KNL1-209ENST00000532347 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
KNL1-209ENST00000532347 SLC35F4A4IF30 521 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms