RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CASTP20810 708 aaKnown RBP18.94■□□□□ 0.62
USP42-207ENST00000521713 CHPF2Q9P2E5 772 aa18.94■□□□□ 0.62
USP42-207ENST00000521713 MYO6Q9UM54 1294 aa18.94■□□□□ 0.62
USP42-207ENST00000521713 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
USP42-207ENST00000521713 SLC39A6Q13433 755 aa18.94■□□□□ 0.62
USP42-207ENST00000521713 MTHFSDQ2M296 383 aaKnown RBP18.94■□□□□ 0.62
USP42-207ENST00000521713 C20orf194Q5TEA3 1177 aa18.94■□□□□ 0.62
USP42-207ENST00000521713 ZNF444Q8N0Y2 327 aaPredicted RBP18.94■□□□□ 0.62
USP42-207ENST00000521713 SMARCE1Q969G3 411 aa18.94■□□□□ 0.62
USP42-207ENST00000521713 A0A1W2PP64 1363 aa18.94■□□□□ 0.62
USP42-207ENST00000521713 KIF2AO00139 706 aaPredicted RBP18.94■□□□□ 0.62
USP42-207ENST00000521713 BMP2KQ9NSY1 1161 aaPredicted RBP18.94■□□□□ 0.62
USP42-207ENST00000521713 ANXA1P04083 346 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 STIM1Q13586 685 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 KSR2Q6VAB6 950 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 NLRP3Q96P20 1036 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 EYA1Q99502 592 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 BAG3O95817 575 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 HOXC9P31274 260 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 MAST1Q9Y2H9 1570 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 MAP3K19Q56UN5 1328 aa18.93■□□□□ 0.62
USP42-207ENST00000521713 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
USP42-207ENST00000521713 ZNF213O14771 459 aa18.92■□□□□ 0.62
USP42-207ENST00000521713 CTCFLQ8NI51 663 aaPredicted RBP18.92■□□□□ 0.62
USP42-207ENST00000521713 ZNF622Q969S3 477 aaKnown RBP eCLIP18.92■□□□□ 0.621e-6■■□□□ 14.2
USP42-207ENST00000521713 DACH1Q9UI36 760 aa18.92■□□□□ 0.62
USP42-207ENST00000521713 PCDH11XQ9BZA7 1347 aa18.92■□□□□ 0.62
USP42-207ENST00000521713 PCDH11YQ9BZA8 1340 aa18.92■□□□□ 0.62
USP42-207ENST00000521713 SEC63Q9UGP8 760 aaKnown RBP18.92■□□□□ 0.62
USP42-207ENST00000521713 ZNF76P36508 570 aa18.92■□□□□ 0.62
USP42-207ENST00000521713 ODF2Q5BJF6 829 aa18.92■□□□□ 0.62
USP42-207ENST00000521713 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
USP42-207ENST00000521713 TMEM2Q9UHN6 1383 aa18.91■□□□□ 0.62
USP42-207ENST00000521713 MCM5P33992 734 aa18.91■□□□□ 0.62
USP42-207ENST00000521713 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
USP42-207ENST00000521713 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
USP42-207ENST00000521713 PZPP20742 1482 aa18.91■□□□□ 0.62
USP42-207ENST00000521713 ZFYVE16Q7Z3T8 1539 aa18.91■□□□□ 0.62
USP42-207ENST00000521713 NAP1L1P55209 391 aaKnown RBP18.91■□□□□ 0.62
USP42-207ENST00000521713 SOS1Q07889 1333 aaPredicted RBP18.91■□□□□ 0.62
USP42-207ENST00000521713 MAP3K5Q99683 1374 aa18.91■□□□□ 0.62
USP42-207ENST00000521713 DEF6Q9H4E7 631 aa18.91■□□□□ 0.62
USP42-207ENST00000521713 PLEKHH1Q9ULM0 1364 aa18.9■□□□□ 0.62
USP42-207ENST00000521713 KIAA0754O94854 1291 aa18.9■□□□□ 0.62
USP42-207ENST00000521713 NFATC2IPQ8NCF5 419 aa18.9■□□□□ 0.62
USP42-207ENST00000521713 NYXQ9GZU5 481 aa18.9■□□□□ 0.62
USP42-207ENST00000521713 BTG4Q9NY30 223 aa18.9■□□□□ 0.62
USP42-207ENST00000521713 SMC2O95347 1197 aa18.9■□□□□ 0.62
USP42-207ENST00000521713 PDILTQ8N807 584 aa18.89■□□□□ 0.61
USP42-207ENST00000521713 SH2B1Q9NRF2 756 aaPredicted RBP18.89■□□□□ 0.61
USP42-207ENST00000521713 GRM8O00222 908 aa18.89■□□□□ 0.61
USP42-207ENST00000521713 CEP131Q9UPN4 1083 aa18.89■□□□□ 0.61
USP42-207ENST00000521713 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
USP42-207ENST00000521713 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
USP42-207ENST00000521713 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
USP42-207ENST00000521713 RANBP6O60518 1105 aaKnown RBP18.89■□□□□ 0.61
USP42-207ENST00000521713 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
USP42-207ENST00000521713 SIRT1Q96EB6 747 aa18.88■□□□□ 0.61
USP42-207ENST00000521713 GOLIM4O00461 696 aa18.88■□□□□ 0.61
USP42-207ENST00000521713 NIP7Q9Y221 180 aaKnown RBP eCLIP18.88■□□□□ 0.61
USP42-207ENST00000521713 PIK3C2GO75747 1445 aa18.88■□□□□ 0.61
USP42-207ENST00000521713 EDC4Q6P2E9 1401 aaKnown RBP18.88■□□□□ 0.61
USP42-207ENST00000521713 TPTE2Q6XPS3 522 aa18.88■□□□□ 0.61
USP42-207ENST00000521713 SPATA32Q96LK8 384 aa18.88■□□□□ 0.61
USP42-207ENST00000521713 CALCOCO1Q9P1Z2 691 aa18.88■□□□□ 0.61
USP42-207ENST00000521713 ORAI2Q96SN7 254 aa18.87■□□□□ 0.61
USP42-207ENST00000521713 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
USP42-207ENST00000521713 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
USP42-207ENST00000521713 ZHX3Q9H4I2 956 aa18.87■□□□□ 0.61
USP42-207ENST00000521713 GSTO1P78417 241 aa18.87■□□□□ 0.61
USP42-207ENST00000521713 NBPF14Q5TI25 921 aa18.87■□□□□ 0.61
USP42-207ENST00000521713 DZIP3Q86Y13 1208 aaKnown RBP18.87■□□□□ 0.61
USP42-207ENST00000521713 AXDND1Q5T1B0 1012 aaPredicted RBP18.86■□□□□ 0.61
USP42-207ENST00000521713 RHPN1Q8TCX5 695 aa18.86■□□□□ 0.61
USP42-207ENST00000521713 C8orf58Q8NAV2 365 aa18.86■□□□□ 0.61
USP42-207ENST00000521713 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
USP42-207ENST00000521713 SBNO1A3KN83 1393 aa18.86■□□□□ 0.61
USP42-207ENST00000521713 IL15P40933 162 aaPredicted RBP18.86■□□□□ 0.61
USP42-207ENST00000521713 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
USP42-207ENST00000521713 TNMDQ9H2S6 317 aa18.86■□□□□ 0.61
USP42-207ENST00000521713 CBFA2T2O43439 604 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 TNIP1Q15025 636 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 UPF3BQ9BZI7 483 aaKnown RBP18.85■□□□□ 0.61
USP42-207ENST00000521713 SLAIN2Q9P270 581 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
USP42-207ENST00000521713 HLA-DOAP06340 250 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 ZFYP08048 801 aaPredicted RBP18.85■□□□□ 0.61
USP42-207ENST00000521713 SLC12A7Q9Y666 1083 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 BMP2KLQ5H9B9 411 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 BABAM1Q9NWV8 329 aa18.85■□□□□ 0.61
USP42-207ENST00000521713 GOLGA6L7A0A1B0GV03 622 aa18.84■□□□□ 0.61
USP42-207ENST00000521713 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
USP42-207ENST00000521713 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
USP42-207ENST00000521713 PDE4BQ07343 736 aa18.84■□□□□ 0.61
USP42-207ENST00000521713 DDX11Q96FC9 970 aa18.84■□□□□ 0.61
USP42-207ENST00000521713 IFIT3O14879 490 aaKnown RBP18.84■□□□□ 0.61
USP42-207ENST00000521713 MRPL50Q8N5N7 158 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms