RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
VMP1-201ENST00000262291 A0A0G2JS52 829 aa16.67■□□□□ 0.26
VMP1-201ENST00000262291 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
VMP1-201ENST00000262291 PIP4K2BP78356 416 aa16.66■□□□□ 0.26
VMP1-201ENST00000262291 NEXNQ0ZGT2 675 aa16.66■□□□□ 0.26
VMP1-201ENST00000262291 TTLL7Q6ZT98 887 aa16.66■□□□□ 0.26
VMP1-201ENST00000262291 ABCC6O95255 1503 aa16.66■□□□□ 0.26
VMP1-201ENST00000262291 ARXQ96QS3 562 aa16.66■□□□□ 0.26
VMP1-201ENST00000262291 RRAGDQ9NQL2 400 aaPredicted RBP16.66■□□□□ 0.26
VMP1-201ENST00000262291 NHSL1Q5SYE7 1610 aa16.65■□□□□ 0.26
VMP1-201ENST00000262291 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
VMP1-201ENST00000262291 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
VMP1-201ENST00000262291 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
VMP1-201ENST00000262291 METTL22Q9BUU2 404 aaPredicted RBP16.65■□□□□ 0.26
VMP1-201ENST00000262291 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
VMP1-201ENST00000262291 MRC1P22897 1456 aa16.65■□□□□ 0.26
VMP1-201ENST00000262291 GCKRQ14397 625 aa16.65■□□□□ 0.26
VMP1-201ENST00000262291 USP26Q9BXU7 913 aa16.65■□□□□ 0.26
VMP1-201ENST00000262291 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
VMP1-201ENST00000262291 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.25
VMP1-201ENST00000262291 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
VMP1-201ENST00000262291 UBE3BQ7Z3V4 1068 aa16.64■□□□□ 0.25
VMP1-201ENST00000262291 ZBTB3Q9H5J0 574 aa16.64■□□□□ 0.25
VMP1-201ENST00000262291 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
VMP1-201ENST00000262291 SYTL4Q96C24 671 aaPredicted RBP16.64■□□□□ 0.25
VMP1-201ENST00000262291 KIF1BPQ96EK5 621 aa16.64■□□□□ 0.25
VMP1-201ENST00000262291 PARP4Q9UKK3 1724 aaKnown RBP16.63■□□□□ 0.25
VMP1-201ENST00000262291 ROBO1Q9Y6N7 1651 aa16.63■□□□□ 0.25
VMP1-201ENST00000262291 ERVV-2B6SEH9 535 aa16.63■□□□□ 0.25
VMP1-201ENST00000262291 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
VMP1-201ENST00000262291 TMOD3Q9NYL9 352 aa16.63■□□□□ 0.25
VMP1-201ENST00000262291 IL25Q9H293 177 aa16.62■□□□□ 0.25
VMP1-201ENST00000262291 PIGBQ92521 554 aa16.61■□□□□ 0.25
VMP1-201ENST00000262291 ERC2O15083 957 aa16.61■□□□□ 0.25
VMP1-201ENST00000262291 NKX1-1Q15270 411 aaPredicted RBP16.61■□□□□ 0.25
VMP1-201ENST00000262291 STAP2Q9UGK3 403 aa16.61■□□□□ 0.25
VMP1-201ENST00000262291 A0A087WZG4 1122 aa16.61■□□□□ 0.25
VMP1-201ENST00000262291 PI4K2BQ8TCG2 481 aa16.61■□□□□ 0.25
VMP1-201ENST00000262291 CCDC8Q9H0W5 538 aaPredicted RBP16.61■□□□□ 0.25
VMP1-201ENST00000262291 CHMLP26374 656 aa16.6■□□□□ 0.25
VMP1-201ENST00000262291 MTX1Q13505 466 aa16.6■□□□□ 0.25
VMP1-201ENST00000262291 AACSQ86V21 672 aa16.6■□□□□ 0.25
VMP1-201ENST00000262291 DNAJC10Q8IXB1 793 aa16.6■□□□□ 0.25
VMP1-201ENST00000262291 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
VMP1-201ENST00000262291 SHANK3Q9BYB0 1731 aa16.59■□□□□ 0.25
VMP1-201ENST00000262291 SASH1O94885 1247 aa16.59■□□□□ 0.25
VMP1-201ENST00000262291 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
VMP1-201ENST00000262291 ESYT1Q9BSJ8 1104 aa16.59■□□□□ 0.25
VMP1-201ENST00000262291 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
VMP1-201ENST00000262291 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
VMP1-201ENST00000262291 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
VMP1-201ENST00000262291 GLI3P10071 1580 aa16.59■□□□□ 0.25
VMP1-201ENST00000262291 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.25
VMP1-201ENST00000262291 CLASRPQ8N2M8 674 aaKnown RBP16.58■□□□□ 0.25
VMP1-201ENST00000262291 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.25
VMP1-201ENST00000262291 UTYO14607 1347 aa16.58■□□□□ 0.24
VMP1-201ENST00000262291 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.24
VMP1-201ENST00000262291 IFIT2P09913 472 aaKnown RBP16.57■□□□□ 0.24
VMP1-201ENST00000262291 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
VMP1-201ENST00000262291 KCPQ6ZWJ8 1503 aa16.57■□□□□ 0.24
VMP1-201ENST00000262291 REC8O95072 547 aa16.57■□□□□ 0.24
VMP1-201ENST00000262291 EAF2Q96CJ1 260 aaPredicted RBP16.57■□□□□ 0.24
VMP1-201ENST00000262291 ATG3Q9NT62 314 aa16.57■□□□□ 0.24
VMP1-201ENST00000262291 TOGARAM1Q9Y4F4 1720 aa16.57■□□□□ 0.24
VMP1-201ENST00000262291 SNX21Q969T3 373 aa16.56■□□□□ 0.24
VMP1-201ENST00000262291 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
VMP1-201ENST00000262291 NOL8Q76FK4 1167 aaKnown RBP16.55■□□□□ 0.24
VMP1-201ENST00000262291 ACSBG1Q96GR2 724 aa16.55■□□□□ 0.24
VMP1-201ENST00000262291 CCDC85AQ96PX6 553 aaPredicted RBP16.55■□□□□ 0.24
VMP1-201ENST00000262291 EXOC5O00471 708 aa16.54■□□□□ 0.24
VMP1-201ENST00000262291 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
VMP1-201ENST00000262291 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
VMP1-201ENST00000262291 AFDNP55196 1824 aaKnown RBP16.54■□□□□ 0.24
VMP1-201ENST00000262291 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
VMP1-201ENST00000262291 PRIM1P49642 420 aaKnown RBP16.54■□□□□ 0.24
VMP1-201ENST00000262291 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
VMP1-201ENST00000262291 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
VMP1-201ENST00000262291 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
VMP1-201ENST00000262291 ARFGEF2Q9Y6D5 1785 aa16.53■□□□□ 0.24
VMP1-201ENST00000262291 SLC4A9Q96Q91 983 aa16.53■□□□□ 0.24
VMP1-201ENST00000262291 TUBGCP6Q96RT7 1819 aa16.53■□□□□ 0.24
VMP1-201ENST00000262291 RABEP1Q15276 862 aa16.53■□□□□ 0.24
VMP1-201ENST00000262291 BOLA2Q9H3K6 86 aa16.53■□□□□ 0.24
VMP1-201ENST00000262291 ECHDC1Q9NTX5 307 aa16.53■□□□□ 0.24
VMP1-201ENST00000262291 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
VMP1-201ENST00000262291 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
VMP1-201ENST00000262291 CASP7P55210 303 aa16.52■□□□□ 0.23
VMP1-201ENST00000262291 TFCP2Q12800 502 aa16.52■□□□□ 0.23
VMP1-201ENST00000262291 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.23
VMP1-201ENST00000262291 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.23
VMP1-201ENST00000262291 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.23
VMP1-201ENST00000262291 CWC25Q9NXE8 425 aaPredicted RBP16.52■□□□□ 0.23
VMP1-201ENST00000262291 CHMP5Q9NZZ3 219 aa16.52■□□□□ 0.23
VMP1-201ENST00000262291 AOX1Q06278 1338 aa16.51■□□□□ 0.23
VMP1-201ENST00000262291 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
VMP1-201ENST00000262291 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
VMP1-201ENST00000262291 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
VMP1-201ENST00000262291 SYNE4Q8N205 404 aa16.51■□□□□ 0.23
VMP1-201ENST00000262291 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
VMP1-201ENST00000262291 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms