RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 SNRPNP63162 240 aaKnown RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 MAP4K2Q12851 820 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 TRAP1Q12931 704 aaKnown RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 CCDC157Q569K6 752 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 PIGGQ5H8A4 983 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 MRPL14Q6P1L8 145 aaKnown RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 ERICH5Q6P6B1 374 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 PGM2L1Q6PCE3 622 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 TMPRSS7Q7RTY8 843 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 NET1Q7Z628 596 aaPredicted RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 ZC3H7AQ8IWR0 971 aaKnown RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 SLC30A8Q8IWU4 369 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 SLC15A3Q8IY34 581 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 CLECL1Q8IZS7 167 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 METTL25Q8N6Q8 603 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 OR52N2Q8NGI0 321 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 SUN3Q8TAQ9 357 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 MIPOL1Q8TD10 442 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 ZFP90Q8TF47 636 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 TMEM125Q96AQ2 219 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 NEURL3Q96EH8 262 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 VPS50Q96JG6 964 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 ART5Q96L15 291 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 CDRT15Q96T59 188 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 PHOX2BQ99453 314 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 CPPED1Q9BRF8 314 aaPredicted RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 SLC35A5Q9BS91 424 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 INPP5KQ9BT40 448 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 THUMPD3Q9BV44 507 aaKnown RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 KAT8Q9H7Z6 458 aaKnown RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 APMAPQ9HDC9 416 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 GIN1Q9NXP7 522 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 SLC25A37Q9NYZ2 338 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 ADA2Q9NZK5 511 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 CD300AQ9UGN4 299 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 GPN3Q9UHW5 284 aaPredicted RBP9.54□□□□□ -0.88
USP39-215ENST00000481409 PADI1Q9ULC6 663 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 PADI2Q9Y2J8 665 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 MAU2Q9Y6X3 613 aa9.54□□□□□ -0.88
USP39-215ENST00000481409 SPAARA0A1B0GVQ0 90 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 TCRBV16S1A1N1A0A5B0 115 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 DUXAA6NLW8 204 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 WASHC1A8K0Z3 465 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 ASNA1O43681 348 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 OR10H2O60403 315 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 DNAJB6O75190 326 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 COQ9O75208 318 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 STK17BO94768 372 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 KCNK5O95279 499 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 TIAF1O95411 115 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 DLGAP3O95886 979 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 NTRK1P04629 796 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ZGLP1P0C6A0 271 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 BMP2P12643 396 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 HOXB6P17509 224 aaKnown RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 HTR1EP28566 365 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 CHI3L1P36222 383 aaPredicted RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 FEN1P39748 380 aaKnown RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 CDKN2CP42773 168 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SLC7A2P52569 658 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 PSPHP78330 225 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 MAT1AQ00266 395 aaKnown RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 RHAGQ02094 409 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 RBBP4Q09028 425 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 TP53BP2Q13625 1128 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 FXNQ16595 210 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SAXO2Q658L1 398 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 C6orf15Q6UXA7 325 aaPredicted RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 COX15Q7KZN9 410 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 GPR155Q7Z3F1 870 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ANKRD46Q86W74 232 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 PROSER1Q86XN7 944 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 PTRH1Q86Y79 214 aaKnown RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 GALNT12Q8IXK2 581 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 MSRB3Q8IXL7 192 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ULK2Q8IYT8 1036 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 MMP21Q8N119 569 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 OR2L13Q8N349 312 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ESX1Q8N693 406 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 GOLM1Q8NBJ4 401 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SLC38A9Q8NBW4 561 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 OR7G1Q8NGA0 311 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 DAZLQ92904 295 aaKnown RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 CTHRC1Q96CG8 243 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ASB9Q96DX5 294 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ELP4Q96EB1 424 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SLC45A3Q96JT2 553 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 PTCHD1Q96NR3 888 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 DGAT2Q96PD7 388 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 YIPF2Q9BWQ6 316 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ALOXE3Q9BYJ1 711 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SPRY4Q9C004 299 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 NRSN2Q9GZP1 204 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ALG2Q9H553 416 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 POLR1BQ9H9Y6 1135 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 IL1RL2Q9HB29 575 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms