RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CD46P15529 392 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 PIK3R1P27986 724 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 DEKP35659 375 aaKnown RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 SERPINB5P36952 375 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 GSTM5P46439 218 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 ST13P50502 369 aaKnown RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 RAE1P78406 368 aaKnown RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 OC90Q02509 493 aaPredicted RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 ACSM2AQ08AH3 577 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 ELOAQ14241 798 aaKnown RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 CEP85LQ5SZL2 805 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 ZNF468Q5VIY5 522 aaPredicted RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 ACSM2BQ68CK6 577 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 TMEM178AQ8NBL3 297 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 OR4K14Q8NGD5 310 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 NUBPLQ8TB37 319 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 SSC4DQ8WTU2 575 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 THAP3Q8WTV1 239 aaPredicted RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 NR4A3Q92570 626 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 PPWD1Q96BP3 646 aaKnown RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 APIPQ96GX9 242 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 METTL2AQ96IZ6 378 aaKnown RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 C5orf34Q96MH7 638 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 FAIM2Q9BWQ8 316 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 RYDENQ9NUL5 291 aaKnown RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP39-208ENST00000455732 ANKRD10Q9NXR5 420 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 ERRFI1Q9UJM3 462 aaPredicted RBP16.1■□□□□ 0.17
USP39-208ENST00000455732 ACTL7BQ9Y614 415 aa16.1■□□□□ 0.17
USP39-208ENST00000455732 WIPF3A6NGB9 483 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 AZIN1O14977 448 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 SLC25A12O75746 678 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 RASAL1O95294 804 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 BPGMP07738 259 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 PRPH2P23942 346 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 TIA1P31483 386 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP39-208ENST00000455732 RNF4P78317 190 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 KANK2Q63ZY3 851 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 SPINK14Q6IE38 97 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 EXOC3L1Q86VI1 746 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 ZNF227Q86WZ6 799 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 GPALPP1Q8IXQ4 340 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 OR5L2Q8NGL0 311 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 DNAJB8Q8NHS0 232 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 SREK1Q8WXA9 508 aaKnown RBP16.09■□□□□ 0.17
USP39-208ENST00000455732 RIT1Q92963 219 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 PGM2Q96G03 612 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 MECRQ9BV79 373 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 CXorf21Q9HAI6 301 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 CCL27Q9Y4X3 112 aa16.09■□□□□ 0.17
USP39-208ENST00000455732 ASPDHA6ND91 283 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 GOLGA6L10A6NI86 522 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 HRKO00198 91 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 CTIFO43310 598 aaKnown RBP16.08■□□□□ 0.16
USP39-208ENST00000455732 NME2P1O60361 137 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 OR2J2O76002 312 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 CRYABP02511 175 aaKnown RBP16.08■□□□□ 0.16
USP39-208ENST00000455732 SP1P08047 785 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 FGF4P08620 206 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 CPMP14384 443 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 DRD2P14416 443 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 NME2P22392 152 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 SERPINB3P29508 390 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 SSR4P51571 173 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 XKP51811 444 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 HK2P52789 917 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 IMPG1Q17R60 797 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 MPEG1Q2M385 716 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 CLEC6AQ6EIG7 209 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 SLC25A25Q6KCM7 469 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 SCIMPQ6UWF3 145 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 C9orf40Q8IXQ3 194 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 MMP21Q8N119 569 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 TMEM156Q8N614 296 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 OR6Y1Q8NGX8 325 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 RASL10BQ96S79 203 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 HES7Q9BYE0 225 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 SHCBP1LQ9BZQ2 653 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 RRAGDQ9NQL2 400 aaPredicted RBP16.08■□□□□ 0.16
USP39-208ENST00000455732 PSME2Q9UL46 239 aa16.08■□□□□ 0.16
USP39-208ENST00000455732 NBPF19A0A087WUL8 3843 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 GNG14A0A1W2PPG7 69 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 A0A1W2PS29 197 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 OR6C76A6NM76 312 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 TM9SF1O15321 606 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 LDLRP01130 860 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 ATP1B1P05026 303 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 CHRNGP07510 517 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 NEFHP12036 1026 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 PORP16435 677 aaPredicted RBP16.07■□□□□ 0.16
USP39-208ENST00000455732 MST1P26927 711 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 SLC37A1P57057 533 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 ERVK-8P63133 956 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 PMP22Q01453 160 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 ARL13AQ5H913 290 aaPredicted RBP16.07■□□□□ 0.16
USP39-208ENST00000455732 BEND6Q5SZJ8 279 aaPredicted RBP16.07■□□□□ 0.16
USP39-208ENST00000455732 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 CYP4Z2PQ8N1L4 340 aa16.07■□□□□ 0.16
USP39-208ENST00000455732 TMEM125Q96AQ2 219 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms